RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 OLR1P78380 273 aa14.39□□□□□ -0.11
CHMP3-202ENST00000393773 CTBP1Q13363 440 aa14.39□□□□□ -0.11
CHMP3-202ENST00000393773 DHX34Q14147 1143 aaKnown RBP14.39□□□□□ -0.11
CHMP3-202ENST00000393773 HERC3Q15034 1050 aa14.39□□□□□ -0.11
CHMP3-202ENST00000393773 CMPK2Q5EBM0 449 aa14.39□□□□□ -0.11
CHMP3-202ENST00000393773 CAND1Q86VP6 1230 aaKnown RBP14.39□□□□□ -0.11
CHMP3-202ENST00000393773 C17orf64Q86WR6 236 aa14.39□□□□□ -0.11
CHMP3-202ENST00000393773 RNF10Q8N5U6 811 aaKnown RBP14.39□□□□□ -0.11
CHMP3-202ENST00000393773 POGLUT1Q8NBL1 392 aa14.39□□□□□ -0.11
CHMP3-202ENST00000393773 ZNF669Q96BR6 464 aaPredicted RBP14.39□□□□□ -0.11
CHMP3-202ENST00000393773 TBC1D20Q96BZ9 403 aa14.39□□□□□ -0.11
CHMP3-202ENST00000393773 FAM129AQ9BZQ8 928 aa14.39□□□□□ -0.11
CHMP3-202ENST00000393773 PCBD2Q9H0N5 130 aa14.39□□□□□ -0.11
CHMP3-202ENST00000393773 PDE10AQ9Y233 779 aa14.39□□□□□ -0.11
CHMP3-202ENST00000393773 ZKSCAN5Q9Y2L8 839 aa14.39□□□□□ -0.11
CHMP3-202ENST00000393773 ARHGAP21Q5T5U3 1957 aa14.39□□□□□ -0.11
CHMP3-202ENST00000393773 AKAP6Q13023 2319 aa14.39□□□□□ -0.11
CHMP3-202ENST00000393773 IGKV3D-11A0A0A0MRZ8 115 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 A0A1B0GTH9 108 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 CTAGE9A4FU28 777 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 NKX2-6A6NCS4 301 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 NDUFS4O43181 175 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 DIAPH2O60879 1101 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 B3GALT4O96024 378 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 TPOP07202 933 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 PTGS2P35354 604 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 KCNJ1P48048 391 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 HLCSP50747 726 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 MEF2AQ02078 507 aaPredicted RBP14.38□□□□□ -0.11
CHMP3-202ENST00000393773 ANKRD22Q5VYY1 191 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 AGTRAPQ6RW13 159 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 LCTLQ6UWM7 567 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 QSOX2Q6ZRP7 698 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 GSTA5Q7RTV2 222 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 RPRMLQ8N4K4 120 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 NFAM1Q8NET5 270 aaPredicted RBP14.38□□□□□ -0.11
CHMP3-202ENST00000393773 SARGQ9BW04 601 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 TSGA10Q9BZW7 698 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 ATG10Q9H0Y0 220 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 CCDC68Q9H2F9 335 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 PLSCR2Q9NRY7 297 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 RNF6Q9Y252 685 aa14.38□□□□□ -0.11
CHMP3-202ENST00000393773 KLF13Q9Y2Y9 288 aaPredicted RBP14.38□□□□□ -0.11
CHMP3-202ENST00000393773 FAM237BA0A1B0GVD1 139 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 TCRBV16S1A1N1A0A5B0 115 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 FAM90A27PA6NNH2 459 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 CHST10O43529 356 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 TOXO94900 526 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 ALOX12P18054 663 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 TFEBP19484 476 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 JAK1P23458 1154 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 CCND1P24385 295 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 CHRNB4P30926 498 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 ART1P52961 327 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 TIAL1Q01085 375 aaKnown RBP eCLIP14.37□□□□□ -0.11
CHMP3-202ENST00000393773 SP140Q13342 867 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 DEFB134Q4QY38 66 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 CASC4Q6P4E1 433 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 CEP128Q6ZU80 1094 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 SULF2Q8IWU5 870 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 AGGF1Q8N302 714 aaeCLIP14.37□□□□□ -0.118e-6■□□□□ 11.2
CHMP3-202ENST00000393773 ABHD11Q8NFV4 315 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 C16orf52Q8NHV5 167 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 ASB5Q8WWX0 329 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 TMEM125Q96AQ2 219 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 AARSD1Q9BTE6 412 aaKnown RBP14.37□□□□□ -0.11
CHMP3-202ENST00000393773 SPNS1Q9H2V7 528 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 SAMD15Q9P1V8 674 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 COMMD10Q9Y6G5 202 aa14.37□□□□□ -0.11
CHMP3-202ENST00000393773 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.36□□□□□ -0.11
CHMP3-202ENST00000393773 FOXO6A8MYZ6 492 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 FCHO1O14526 889 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 HS6ST1O60243 411 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 CEP104O60308 925 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 CDC40O60508 579 aaKnown RBP eCLIP14.36□□□□□ -0.11
CHMP3-202ENST00000393773 B4GALT2O60909 372 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 ZNF888P0CJ79 500 aaPredicted RBP14.36□□□□□ -0.11
CHMP3-202ENST00000393773 MAOAP21397 527 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 GRK3P35626 688 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 NR0B1P51843 470 aaKnown RBP14.36□□□□□ -0.11
CHMP3-202ENST00000393773 TERF1P54274 439 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 BTG2P78543 158 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 DHX9Q08211 1270 aaKnown RBP14.36□□□□□ -0.11
CHMP3-202ENST00000393773 NAE1Q13564 534 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 PWP1Q13610 501 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 THOC5Q13769 683 aaKnown RBP14.36□□□□□ -0.11
CHMP3-202ENST00000393773 PHKG1Q16816 387 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 EMC4Q5J8M3 183 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 LRRC8EQ6NSJ5 796 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 DMRTC2Q8IXT2 367 aaPredicted RBP14.36□□□□□ -0.11
CHMP3-202ENST00000393773 ZFP62Q8NB50 900 aaPredicted RBP14.36□□□□□ -0.11
CHMP3-202ENST00000393773 APCDD1LQ8NCL9 501 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 OR4K1Q8NGD4 311 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 LILRB4Q8NHJ6 448 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 NT5CQ8TCD5 201 aa14.36□□□□□ -0.11
CHMP3-202ENST00000393773 TP63Q9H3D4 680 aaPredicted RBP14.36□□□□□ -0.11
CHMP3-202ENST00000393773 NCKAP5O14513 1909 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 TRBC2A0A5B9 178 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 C4orf51C9J302 202 aa14.35□□□□□ -0.11
CHMP3-202ENST00000393773 FGGP02679 453 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms