RNA–Protein interactions for RNA: ENST00000393272.7

NPHP1-203, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 2,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-203ENST00000393272 DDX53Q86TM3 631 aaKnown RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 GPSM1Q86YR5 675 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 C7orf57Q8NEG2 295 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 OR11H7Q8NGC8 314 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 UFD1Q92890 307 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 RNF34Q969K3 372 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 PGAP3Q96FM1 320 aaPredicted RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 IMP4Q96G21 291 aaKnown RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 C7orf34Q96L11 122 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 ZSWIM3Q96MP5 696 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 PPP1R2P1Q96PQ5 205 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 SHARPINQ9H0F6 387 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 SLC25A51Q9H1U9 297 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 CLEC4MQ9H2X3 399 aaPredicted RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 ZNF408Q9H9D4 720 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 SLC35C2Q9NQQ7 365 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 CATSPERZQ9NTU4 200 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 TSR3Q9UJK0 312 aaKnown RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 ZNF222Q9UK12 451 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 RPS6KA6Q9UK32 745 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 MRPS7Q9Y2R9 242 aaKnown RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 LSM2Q9Y333 95 aaKnown RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 FKBP7Q9Y680 259 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 CSNK1G3Q9Y6M4 447 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 CDH10Q9Y6N8 788 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 ZSWIM8A7E2V4 1837 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 PRAMEF33A0A0G2JMD5 474 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 A0A1B0GVM2 712 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 TPST2O60704 377 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 PRAMEF10O60809 474 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 PTP4A3O75365 173 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 CSO75390 466 aaKnown RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 PRAMEF1O95521 474 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 LGI1O95970 557 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 CHRM5P08912 532 aaPredicted RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 HBQ1P09105 142 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 ITGALP20701 1170 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 NUP62P37198 522 aaPredicted RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 ERVK-21P61565 698 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 CACNB2Q08289 660 aaPredicted RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 PPIGQ13427 754 aaKnown RBP eCLIP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 SPHARQ15513 63 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 VMACQ2NL98 169 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 ZNF628Q5EBL2 1059 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 C6orf132Q5T0Z8 1188 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 C22orf42Q6IC83 251 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 CNIH2Q6PI25 160 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 GDPGP1Q6ZNW5 385 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 OTOP2Q7RTS6 562 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 ADGRD2Q7Z7M1 963 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 PDZD3Q86UT5 571 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 TAC4Q86UU9 113 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 ZNF655Q8N720 491 aaPredicted RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 DNAJC5GQ8N7S2 189 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 SYT14Q8NB59 555 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 OR7G3Q8NG95 312 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 OR10G2Q8NGC3 310 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 OR9Q1Q8NGQ5 310 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 OR52J3Q8NH60 311 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 KCTD13Q8WZ19 329 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 B3GALT6Q96L58 329 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 FOPNLQ96NB1 174 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 ZNF416Q9BWM5 594 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 KCNH6Q9H252 994 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 SAV1Q9H4B6 383 aaPredicted RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 SERHL2Q9H4I8 314 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 PPP1R3EQ9H7J1 279 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 ANKRA2Q9H9E1 313 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 SLC28A3Q9HAS3 691 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 TMEM30AQ9NV96 361 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 TXNL4BQ9NX01 149 aaKnown RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 NDUFB11Q9NX14 153 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 CNOT2Q9NZN8 540 aaKnown RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 SH3BP4Q9P0V3 963 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 SSR3Q9UNL2 185 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 COPS3Q9UNS2 423 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 RALGAPA2Q2PPJ7 1873 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 A0A1W2PPL8 197 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 ONECUT3O60422 494 aaPredicted RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 TLR5O60602 858 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 CCNB2O95067 398 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 IL1AP01583 271 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 MMP2P08253 660 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 POU2F1P14859 743 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 NNMTP40261 264 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 CRYBA2P53672 197 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 CAV3P56539 151 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 ERVFC1P60507 584 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 RAB14P61106 215 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 C2orf80Q0P641 193 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 TTLL9Q3SXZ7 439 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 LGALSLQ3ZCW2 172 aaPredicted RBP6.91□□□□□ -1.3
NPHP1-203ENST00000393272 SGO1Q5FBB7 561 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 BCL2L15Q5TBC7 163 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 TFAP2EQ6VUC0 442 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 RTL4Q6ZR62 310 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 CBLL1Q75N03 491 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 LRRC17Q8N6Y2 441 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 CLDN22Q8N7P3 220 aa6.91□□□□□ -1.3
NPHP1-203ENST00000393272 SIDT2Q8NBJ9 832 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms