RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 GOLGA8MH3BSY2 632 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 AIM2O14862 343 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 NDUFS4O43181 175 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 TLX3O43711 291 aaPredicted RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 OAZ2O95190 189 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 OPN1LWP04000 364 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 RD3LP0DJH9 198 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 CYP2D6P10635 497 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 UQCRC2P22695 453 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 NAGLUP54802 743 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 PEX6Q13608 980 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 SOWAHAQ2M3V2 549 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 ALKBH6Q3KRA9 238 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 C6orf10Q5SRN2 563 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 TXNRD3NBQ6F5E7 133 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 METAP1DQ6UB28 335 aaPredicted RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 LRRC6Q86X45 466 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 OR2T3Q8NH03 318 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 TAS1R2Q8TE23 839 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 ACOT11Q8WXI4 607 aaPredicted RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 AKR1E2Q96JD6 320 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 FRMD8P1Q9BZ68 369 aaPredicted RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 TSGA10Q9BZW7 698 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 SAV1Q9H4B6 383 aaPredicted RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 AZI2Q9H6S1 392 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 MIOSQ9NXC5 875 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 TUBA8Q9NY65 449 aaPredicted RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 FAM53CQ9NYF3 392 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 CNOT6Q9ULM6 557 aaKnown RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 SPIN1Q9Y657 262 aaPredicted RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 FGD5Q6ZNL6 1462 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 ARAP1Q96P48 1450 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 XIRP1Q702N8 1843 aaKnown RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 OR2W5A6NFC9 320 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 RHODO00212 210 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 ALOX15BO15296 676 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 PRAF2O60831 178 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 PIGNO95427 931 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 FCER2P06734 321 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 ANXA5P08758 320 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 IRF2P14316 349 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 S100A5P33763 92 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 GCKP35557 465 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 UQCRFS1P47985 274 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 XIAPP98170 497 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 SLC3A1Q07837 685 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 XRCC4Q13426 336 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 SNCBQ16143 134 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 WHAMMP3Q1A5X7 153 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 POM121L1PQ3SYA9 428 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 ARMCX4Q5H9R4 360 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 GGNBP1Q5YKI7 109 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 DEGS2Q6QHC5 323 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 C22orf34Q6ZV56 151 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 MEX3DQ86XN8 651 aaKnown RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 GRAMD2AQ8IUY3 354 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 Q8N9G6 341 aaPredicted RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 NOA1Q8NC60 698 aaKnown RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 LRRC45Q96CN5 670 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 CCDC124Q96CT7 223 aaKnown RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 OMA1Q96E52 524 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 TIMD4Q96H15 378 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 ZFYVE19Q96K21 471 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 TIMM29Q9BSF4 260 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 DPAGT1Q9H3H5 408 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 TMEM185BQ9H7F4 350 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 CYSLTR2Q9NS75 346 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 ZNF335Q9H4Z2 1342 aaPredicted RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 A0A1B0GWJ7 208 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 TMEM89A2RUT3 159 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 ARHGEF33A8MVX0 844 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 LEFTY2O00292 366 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 PRRG2O14669 202 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 RGS16O15492 202 aaPredicted RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 ARHGEF9O43307 516 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 LANCL1O43813 399 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 MBL2P11226 248 aaPredicted RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 ACP1P24666 158 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 PDHA2P29803 388 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 ARRB2P32121 409 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 ASCL1P50553 236 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 TOB1P50616 345 aaPredicted RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 PRMT2P55345 433 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 HKDC1Q2TB90 917 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 MPPE1Q53F39 396 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 ESCO2Q56NI9 601 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 PTRHD1Q6GMV3 140 aaKnown RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 TYW3Q6IPR3 259 aaKnown RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 VITQ6UXI7 678 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 CEACAM20Q6UY09 585 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 DLEU7Q6UYE1 221 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 DPPA4Q7L190 304 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 NEK8Q86SG6 692 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 FAM98AQ8NCA5 519 aaKnown RBP3.39□□□□□ -1.87
XRN1-202ENST00000392981 KCNH5Q8NCM2 988 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 SLC20A1Q8WUM9 679 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 ECHDC3Q96DC8 303 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 CBWD1Q9BRT8 395 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 LRRC2Q9BYS8 371 aa3.39□□□□□ -1.87
XRN1-202ENST00000392981 HHATLQ9HCP6 504 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms