RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 FAM46DQ8NEK8 389 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 WRAP53Q9BUR4 548 aaKnown RBP14.31□□□□□ -0.12
CCDC50-201ENST00000392455 SLC2A11Q9BYW1 496 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 ZNF286AQ9HBT8 521 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 ATG4BQ9Y4P1 393 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 NEMP2A6NFY4 417 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 SEC13P55735 322 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 TAS2R40P59535 323 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 LASP1Q14847 261 aaKnown RBP14.31□□□□□ -0.12
CCDC50-201ENST00000392455 SLC44A1Q8WWI5 657 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 PWWP2AQ96N64 755 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 TRIP11Q15643 1979 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 OR5H15A6NDH6 313 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 OR5H14A6NHG9 310 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 OR5H1A6NKK0 313 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 ZNF267Q14586 743 aaPredicted RBP14.31□□□□□ -0.12
CCDC50-201ENST00000392455 PSD4Q8NDX1 1056 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 AGXT2Q9BYV1 514 aa14.31□□□□□ -0.12
CCDC50-201ENST00000392455 A0A0U1RQJ8 604 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 RNASEH2AO75792 299 aaKnown RBP14.3□□□□□ -0.12
CCDC50-201ENST00000392455 SFTPBP07988 381 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 MMP3P08254 477 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 NCBP2P52298 156 aaKnown RBP eCLIP14.3□□□□□ -0.12
CCDC50-201ENST00000392455 TREML2Q5T2D2 321 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 RTL6Q6ICC9 239 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 UGT2A3Q6UWM9 527 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 DNAJC22Q8N4W6 341 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 ZBTB26Q9HCK0 441 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 XPNPEP1Q9NQW7 623 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 PNPOQ9NVS9 261 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 UBIAD1Q9Y5Z9 338 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 FRKP42685 505 aaPredicted RBP14.3□□□□□ -0.12
CCDC50-201ENST00000392455 BRCC3P46736 316 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 MAN2A2P49641 1150 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 DEFB115Q30KQ5 88 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 BEST3Q8N1M1 668 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 SPPL2BQ8TCT7 592 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 COL21A1Q96P44 957 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 LRRC4CQ9HCJ2 640 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 Q9N2J8 555 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 CD84Q9UIB8 345 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 ZNF638Q14966 1978 aaKnown RBP14.3□□□□□ -0.12
CCDC50-201ENST00000392455 MAGEA11P43364 429 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 RAB11BQ15907 218 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 SMG8Q8ND04 991 aaKnown RBP14.3□□□□□ -0.12
CCDC50-201ENST00000392455 C17orf62Q9BQA9 187 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 C1RP00736 705 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 IL7P13232 177 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 WNT3AP56704 352 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 CAMK2DQ13557 499 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 TRABD2AQ86V40 505 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 FAXDC2Q96IV6 333 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 TMEM109Q9BVC6 243 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 ATG10Q9H0Y0 220 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 TLR4O00206 839 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 MAOAP21397 527 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 PRKCHP24723 683 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 C2orf15Q8WU43 125 aaKnown RBP14.3□□□□□ -0.12
CCDC50-201ENST00000392455 SLC13A3Q8WWT9 602 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 NDRG1Q92597 394 aaKnown RBP14.3□□□□□ -0.12
CCDC50-201ENST00000392455 DEFB118Q96PH6 123 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 FNIP2Q9P278 1114 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 PRELID3BQ9Y3B1 194 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 DFNA5O60443 496 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 WASP42768 502 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 TEX44Q53QW1 395 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 KANK2Q63ZY3 851 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 VTCN1Q7Z7D3 282 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 G6PC3Q9BUM1 346 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 EFCAB11Q9BUY7 163 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 ACTL8Q9H568 366 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 GNG8Q9UK08 70 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 TRBV23OR9-2A0A075B6M9 112 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 BMP6P22004 513 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 ERVK-8P63133 956 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 GK5Q6ZS86 529 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 DAZAP1Q96EP5 407 aaKnown RBP14.3□□□□□ -0.12
CCDC50-201ENST00000392455 SAMD10Q9BYL1 202 aa14.3□□□□□ -0.12
CCDC50-201ENST00000392455 ATP6V1G2-DDX39BF2Z307 99 aa14.29□□□□□ -0.12
CCDC50-201ENST00000392455 SEPT4O43236 478 aa14.29□□□□□ -0.12
CCDC50-201ENST00000392455 CSNK2A2P19784 350 aaPredicted RBP14.29□□□□□ -0.12
CCDC50-201ENST00000392455 MAGP20916 626 aa14.29□□□□□ -0.12
CCDC50-201ENST00000392455 GRM5P41594 1212 aa14.29□□□□□ -0.12
CCDC50-201ENST00000392455 CAMLGP49069 296 aa14.29□□□□□ -0.12
CCDC50-201ENST00000392455 ZNF829Q3KNS6 432 aaPredicted RBP14.29□□□□□ -0.12
CCDC50-201ENST00000392455 OR14C36Q8NHC7 312 aa14.29□□□□□ -0.12
CCDC50-201ENST00000392455 ZNF419Q96HQ0 510 aaPredicted RBP14.29□□□□□ -0.12
CCDC50-201ENST00000392455 UBXN10Q96LJ8 280 aa14.29□□□□□ -0.12
CCDC50-201ENST00000392455 IPPKQ9H8X2 491 aa14.29□□□□□ -0.12
CCDC50-201ENST00000392455 PNO1Q9NRX1 252 aaKnown RBP14.29□□□□□ -0.12
CCDC50-201ENST00000392455 PARPBPQ9NWS1 579 aa14.29□□□□□ -0.12
CCDC50-201ENST00000392455 AMY2BP19961 511 aa14.29□□□□□ -0.12
CCDC50-201ENST00000392455 EEF1A1P68104 462 aaKnown RBP14.29□□□□□ -0.12
CCDC50-201ENST00000392455 NOMO3P69849 1222 aa14.29□□□□□ -0.12
CCDC50-201ENST00000392455 CLCQ05315 142 aa14.29□□□□□ -0.12
CCDC50-201ENST00000392455 EEF1A1P5Q5VTE0 462 aa14.29□□□□□ -0.12
CCDC50-201ENST00000392455 FAM198BQ6UWH4 519 aa14.29□□□□□ -0.12
CCDC50-201ENST00000392455 OR9A4Q8NGU2 314 aa14.29□□□□□ -0.12
CCDC50-201ENST00000392455 TNFRSF25Q93038 417 aa14.29□□□□□ -0.12
CCDC50-201ENST00000392455 P2RY11Q96G91 374 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms