RNA–Protein interactions for RNA: ENST00000391993.7

TRAF3IP1-202, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-202ENST00000391993 TOGARAM1Q9Y4F4 1720 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 FXYD6-FXYD2A0A087WZ82 144 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 C2orf92A0A1B0GVN3 265 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ZNF487B1APH4 448 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 FAM227AF5H4B4 570 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 NPM3O75607 178 aaKnown RBP16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 STARP49675 285 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 C2orf73Q8N5S3 287 aaPredicted RBP16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 RIPOR3Q96MK2 946 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 FCRL4Q96PJ5 515 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TTTY10Q9BZA0 68 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 DERL2Q9GZP9 239 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 FXYD6Q9H0Q3 95 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 FAM105AQ9NUU6 356 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 PCMT1P22061 227 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 GRK5P34947 590 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 SOX4Q06945 474 aaPredicted RBP16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ABRQ12979 859 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 CHIT1Q13231 466 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 FCN2Q15485 313 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TMIGD1Q6UXZ0 262 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 PLPPR4Q7Z2D5 763 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TRIB2Q92519 343 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ERMAPQ96PL5 475 aaPredicted RBP16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 PAK6Q9NQU5 681 aaPredicted RBP16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 REV1Q9UBZ9 1251 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ACSL6Q9UKU0 697 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 USP3Q9Y6I4 520 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 CD8B2A6NJW9 211 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 SCO2O43819 266 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 HPGDSO60760 199 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 IFNW1P05000 195 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ANXA4P09525 319 aaPredicted RBP16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 MSL3P1P0C860 447 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 CD8BP10966 210 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 KELP23276 732 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TGFBR2P37173 567 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ERVFC1P60507 584 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 SLX4IPQ5VYV7 408 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 WASH2PQ6VEQ5 465 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 RIMKLAQ8IXN7 391 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 C9orf43Q8TAL5 461 aaPredicted RBP16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 COQ10AQ96MF6 247 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 CRTAC1Q9NQ79 661 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 SEC14L4Q9UDX3 406 aa16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 CDV3Q9UKY7 258 aaKnown RBP16.41■□□□□ 0.22
TRAF3IP1-202ENST00000391993 L7N2F9 121 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 RGS13O14921 159 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 CAPN5O15484 640 aaPredicted RBP16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 RFPL3O75679 317 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 NPPAP01160 153 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 MTHFD2P13995 350 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 FDXRP22570 491 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TACR1P25103 407 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 CDKN2CP42773 168 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 NFKBIDQ8NI38 313 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 SCRN2Q96FV2 425 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 POFUT2Q9Y2G5 429 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 ANXA3P12429 323 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 HOXD8P13378 290 aaPredicted RBP16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 IL20RBQ6UXL0 311 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TSSK6Q9BXA6 273 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 NMUR1Q9HB89 426 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 TREX1Q9NSU2 369 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 DLGAP4Q9Y2H0 992 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 NRCAMQ92823 1304 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 INPPL1O15357 1258 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 UBE2R2Q712K3 238 aaPredicted RBP16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 DNAJC22Q8N4W6 341 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 SAMD12Q8N8I0 201 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 SYT14Q8NB59 555 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 DNAJA4Q8WW22 397 aaPredicted RBP16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 SLC39A13Q96H72 371 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 DUSP26Q9BV47 211 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 NUDT4Q9NZJ9 180 aa16.4■□□□□ 0.22
TRAF3IP1-202ENST00000391993 B4DXG7 233 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 J3KTA2 159 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 SLC16A6O15403 523 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 WARSP23381 471 aaKnown RBP16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 XKP51811 444 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 DCST1Q5T197 706 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 FAM171A1Q5VUB5 890 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 GAL3ST1Q99999 423 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 GORASP2Q9H8Y8 452 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 SEMA3GQ9NS98 782 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 DNMT3BQ9UBC3 853 aaKnown RBP16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 ENOPH1Q9UHY7 261 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 PCDHGB2Q9Y5G2 931 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 RAI2Q9Y5P3 530 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 HS3ST4Q9Y661 456 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 ITGB4P16144 1822 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 UPK1AO00322 258 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 DSCR3O14972 297 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 AIF1P55008 147 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 KEAP1Q14145 624 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 CDONQ4KMG0 1287 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 ZNF367Q7RTV3 350 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 ZNF433Q8N7K0 673 aaPredicted RBP16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 HMGB4Q8WW32 186 aa16.39■□□□□ 0.21
TRAF3IP1-202ENST00000391993 SLC9A6Q92581 669 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms