RNA–Protein interactions for RNA: ENST00000390846.1

SNORA40.19-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.19-201ENST00000390846 PCDH20Q8N6Y1 951 aaKnown RBP2□□□□□ -2.09
SNORA40.19-201ENST00000390846 PRR26Q8N8Z3 221 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 STKLD1Q8NE28 680 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 GPRC5AQ8NFJ5 357 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 OR52K1Q8NGK4 314 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 PSMA8Q8TAA3 256 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 LIPHQ8WWY8 451 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 P3H4Q92791 437 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 RPL3LQ92901 407 aaKnown RBP2□□□□□ -2.09
SNORA40.19-201ENST00000390846 P2RX5Q93086 422 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 TMEM18Q96B42 140 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 MOB3AQ96BX8 217 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 LINGO1Q96FE5 620 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 SLC41A3Q96GZ6 507 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 ZNF419Q96HQ0 510 aaPredicted RBP2□□□□□ -2.09
SNORA40.19-201ENST00000390846 RAB40CQ96S21 281 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 ZBTB18Q99592 522 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 MEIS3Q99687 375 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 PRMT1Q99873 361 aaKnown RBP2□□□□□ -2.09
SNORA40.19-201ENST00000390846 SPAG8Q99932 426 aaPredicted RBP2□□□□□ -2.09
SNORA40.19-201ENST00000390846 TMEM204Q9BSN7 226 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 MMTAG2Q9BU76 263 aaKnown RBP2□□□□□ -2.09
SNORA40.19-201ENST00000390846 CAPS2Q9BXY5 557 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 POLDIP3Q9BY77 421 aaKnown RBP2□□□□□ -2.09
SNORA40.19-201ENST00000390846 DDX47Q9H0S4 455 aaKnown RBP2□□□□□ -2.09
SNORA40.19-201ENST00000390846 LRRC40Q9H9A6 602 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 PELI2Q9HAT8 420 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 CLK4Q9HAZ1 481 aaKnown RBP2□□□□□ -2.09
SNORA40.19-201ENST00000390846 KCNK13Q9HB14 408 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 GDAP2Q9NXN4 497 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 BARHL2Q9NY43 387 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 RAI14Q9P0K7 980 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 B3GAT1Q9P2W7 334 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 ZMAT5Q9UDW3 170 aaKnown RBP2□□□□□ -2.09
SNORA40.19-201ENST00000390846 SUN2Q9UH99 717 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 BAIAP2L1Q9UHR4 511 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 PSME2Q9UL46 239 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 MGAT4BQ9UQ53 548 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 KLHDC2Q9Y2U9 406 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 TMED7Q9Y3B3 224 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 RAP2CQ9Y3L5 183 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 TMED3Q9Y3Q3 217 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 RAI2Q9Y5P3 530 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 CUX2O14529 1486 aa2□□□□□ -2.09
SNORA40.19-201ENST00000390846 DOCK7Q96N67 2140 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 A0A096LPK6 155 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 RNF222A6NCQ9 220 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 ANTXRLA6NF34 631 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 LRRIQ4A6NIV6 560 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 BECN2A8MW95 431 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 ANKRD66B4E2M5 251 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 INAFM1C9JVW0 142 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 H0YIV9 168 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 H3BMM5 538 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 I6L893 689 aaPredicted RBP1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 TEX28O15482 410 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 MLNRO43193 412 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 ZNF264O43296 627 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 HSPA12AO43301 675 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 AKR7A2O43488 359 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 TBX19O60806 448 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 DNAJB6O75190 326 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 IFNA2P01563 188 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 CA3P07451 260 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 HAPLN1P10915 354 aaPredicted RBP1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 ANXA8P13928 327 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 ZNF12P17014 697 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 TPSB2P20231 275 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 MARCKSP29966 332 aaPredicted RBP1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 SRD5A2P31213 254 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 HNRNPH1P31943 449 aaKnown RBP1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 PRDX2P32119 198 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 OTX2P32243 289 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 PTGFRP43088 359 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 TNFRSF4P43489 277 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 IER3P46695 156 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 NPBWR1P48145 328 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 RFX2P48378 723 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 SLC11A1P49279 550 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 RGS4P49798 205 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 ETV1P50549 477 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 TNFSF10P50591 281 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 PRMT2P55345 433 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 DSCR9P59020 149 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 EIF3EP60228 445 aaKnown RBP1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 SNRPEP62304 92 aaKnown RBP1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 HERV-K104P63124 156 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 XIAPP98170 497 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 PPP1R8Q12972 351 aaKnown RBP1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 SRSF5Q13243 272 aaKnown RBP1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 DOC2AQ14183 400 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 PTGR1Q14914 329 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 TPSAB1Q15661 275 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 NPTX1Q15818 432 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 CAMK4Q16566 473 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 HADHQ16836 314 aaKnown RBP1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 ZNF284Q2VY69 593 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 ALKBH6Q3KRA9 238 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 UGT3A2Q3SY77 523 aa1.99□□□□□ -2.09
SNORA40.19-201ENST00000390846 SLC36A3Q495N2 470 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms