RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 KIR2DS3Q14952 304 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 GTDC1Q4AE62 458 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 ZNF425Q6IV72 752 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 NANOGP8Q6NSW7 305 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 GALNT18Q6P9A2 607 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 GKN2Q86XP6 184 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 MMP21Q8N119 569 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 DPP10Q8N608 796 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 RSC1A1Q92681 617 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 METTL2AQ96IZ6 378 aaKnown RBP11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 TRAPPC9Q96Q05 1148 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 HOPXQ9BPY8 73 aaPredicted RBP11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 INPP5KQ9BT40 448 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 ZNF717Q9BY31 904 aaPredicted RBP11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 PIF1Q9H611 641 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 NT5DC2Q9H857 520 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 NANOGQ9H9S0 305 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 EVA1BQ9NVM1 165 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 STOML1Q9UBI4 398 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 SPASTQ9UBP0 616 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 SPTBP11277 2137 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 GABRR3A8MPY1 467 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 C4orf51C9J302 202 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 TRIM38O00635 465 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 DFNA5O60443 496 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 DNAJA2O60884 412 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 GSNP06396 782 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 LAMP1P11279 417 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 PIM1P11309 404 aaPredicted RBP11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 ACADSP16219 412 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 TPP2P29144 1249 aaPredicted RBP11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 HOXA6P31267 233 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 PLA2G16P53816 162 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 HNRNPKP61978 463 aaKnown RBP eCLIP11.65□□□□□ -0.546e-12■■■■□ 21.8
SPTBN1-203ENST00000389980 BNIP3Q12983 259 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 LYSMD4Q5XG99 296 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 LRRC74BQ6ZQY2 392 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 DGLUCYQ7Z3D6 616 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 UBE3DQ7Z6J8 389 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 WDR5BQ86VZ2 330 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 PAQR7Q86WK9 346 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 C1orf210Q8IVY1 113 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 FAM9CQ8IZT9 166 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 ARL14Q8N4G2 192 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 TMEM105Q8N8V8 129 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 AMER3Q8N944 861 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 SLC26A7Q8TE54 656 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 C16orf78Q8WTQ4 265 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 TMEM125Q96AQ2 219 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 SLC22A18Q96BI1 424 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 TESCQ96BS2 214 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 PITHD1Q9GZP4 211 aaPredicted RBP11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 REXO4Q9GZR2 422 aaKnown RBP11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 LHX9Q9NQ69 397 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 FSCN3Q9NQT6 498 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 VAPAQ9P0L0 249 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 STX18Q9P2W9 335 aaKnown RBP11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 CD300AQ9UGN4 299 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 ADGRE2Q9UHX3 823 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 SNX7Q9UNH6 387 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 USP22Q9UPT9 525 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 EXO1Q9UQ84 846 aaKnown RBP11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 NEUROG3Q9Y4Z2 214 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 PCDHA9Q9Y5H5 950 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 SNX11Q9Y5W9 270 aa11.65□□□□□ -0.54
SPTBN1-203ENST00000389980 CCDC163A0A0D9SF12 145 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 SCAMP2O15127 329 aaKnown RBP11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 NDUFS4O43181 175 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 ZW10O43264 779 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 NOBOXO60393 691 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 PIAS2O75928 621 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 KCNH1O95259 989 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 ANPEPP15144 967 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 BSGP35613 385 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 CDKN2CP42773 168 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 MTPNP58546 118 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 TAS2R50P59544 299 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 ZNF763Q0D2J5 394 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 HYAL2Q12891 473 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 PWP1Q13610 501 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 GPR180Q86V85 440 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 IFNEQ86WN2 208 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 ZFPM2Q8WW38 1151 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 CGREF1Q99674 301 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 TWSG1Q9GZX9 223 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 SERHLQ9NQF3 203 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 SLC25A37Q9NYZ2 338 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 ABCD2Q9UBJ2 740 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 PCDHGA4Q9Y5G9 962 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 SCN2AQ99250 2005 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 ADAMTS9Q9P2N4 1935 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 LRIT2A6NDA9 550 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 TMEM221A6NGB7 291 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 M0R296 226 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 HRO43593 1189 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 CTSVO60911 334 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 CLEC3AO75596 197 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 C1QCP02747 245 aa11.64□□□□□ -0.55
SPTBN1-203ENST00000389980 KIR3DL1P43629 444 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms