RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 MYL4P12829 197 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 HSD3B2P26439 372 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 HMGCS2P54868 508 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 EIF5P55010 431 aaKnown RBP-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 CTAG1AP78358 180 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 BTKQ06187 659 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 GRIK3Q13003 919 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 MAD2L1Q13257 205 aaPredicted RBP-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 ORC2Q13416 577 aaPredicted RBP-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 CDH18Q13634 790 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 FZD2Q14332 565 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 SQLEQ14534 574 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 ZNF267Q14586 743 aaPredicted RBP-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 TAB1Q15750 504 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 ITPRIPL2Q3MIP1 535 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 CASC10Q5T4H9 136 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 TMEM198Q66K66 360 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 SIGIRRQ6IA17 410 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 HCP5Q6MZN7 132 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 FAM199XQ6PEV8 388 aaPredicted RBP-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 PAPD4Q6PIY7 484 aaKnown RBP-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 SMARCD3Q6STE5 483 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 SIGLEC15Q6ZMC9 328 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 FCRLAQ7L513 359 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 RPAINQ86UA6 219 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 DNAAF5Q86Y56 855 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 APOBEC3FQ8IUX4 373 aaKnown RBP-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 ZNF567Q8N184 647 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 CPXM2Q8N436 756 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 KIR3DL3Q8N743 410 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 ZIC4Q8N9L1 334 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 L3MBTL4Q8NA19 623 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 KIAA0895Q8NCT3 520 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 OR1L3Q8NH93 324 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 PPP1R35Q8TAP8 253 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 NEIL3Q8TAT5 605 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 FAM213BQ8TBF2 198 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 CHAC2Q8WUX2 184 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 PABPC5Q96DU9 382 aaKnown RBP-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 CELF6Q96J87 481 aaKnown RBP-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 PANX2Q96RD6 677 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 TAAR6Q96RI8 345 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 MCCC1Q96RQ3 725 aaPredicted RBP-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 HSPB9Q9BQS6 159 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 KIFC3Q9BVG8 833 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 USP44Q9H0E7 712 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 ALX4Q9H161 411 aaPredicted RBP-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 SEPSECSQ9HD40 501 aaKnown RBP-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 LHX9Q9NQ69 397 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 SDR39U1Q9NRG7 319 aaPredicted RBP-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 ACSS1Q9NUB1 689 aaPredicted RBP-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 SLC52A1Q9NWF4 448 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 OPN4Q9UHM6 478 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 ZNF225Q9UK10 706 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 TRHDEQ9UKU6 1024 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 MKLN1Q9UL63 735 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 DTNAQ9Y4J8 743 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 IL16Q14005 1332 aa-1.15□□□□□ -2.59
RNU6-540P-201ENST00000384622 A0A1B0GVC2 190 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 KANSL1LA0AUZ9 987 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 MEIS3P1A6NDR6 274 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 FRS3O43559 492 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 PRC1O43663 620 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 RTN2O75298 545 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 METTL18O95568 372 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 SEMA4FO95754 770 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 FTCDO95954 541 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 AK1P00568 194 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 CD2P06729 351 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 H1F0P07305 194 aaKnown RBP-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 GZMAP12544 262 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 CRISP2P16562 243 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 ELAVL4P26378 380 aaKnown RBP-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 KLRK1P26718 216 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 HMGCLP35914 325 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 CTRLP40313 264 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 TNFRSF4P43489 277 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 RPS9P46781 194 aaKnown RBP-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 UQCRFS1P47985 274 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 CEBPDP49716 269 aaPredicted RBP-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 NDST2P52849 883 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 ERVK-16P61578 105 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 SORDQ00796 357 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 CHRNDQ07001 517 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 IFT88Q13099 833 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 DAG1Q14118 895 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 SERTAD2Q14140 314 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 TNIP1Q15025 636 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 IRF4Q15306 451 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 CDKN3Q16667 212 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 PRICKLE4Q2TBC4 344 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 KRTAP25-1Q3LHN0 102 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 ASB16-AS1Q495Z4 193 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 COBLL1Q53SF7 1204 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 SLC25A53Q5H9E4 307 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 ACSM2BQ68CK6 577 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 FAM173BQ6P4H8 233 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 CTR9Q6PD62 1173 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 GJB7Q6PEY0 223 aa-1.16□□□□□ -2.6
RNU6-540P-201ENST00000384622 LINC00696Q6ZRV3 163 aa-1.16□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms