RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ADGRG6Q86SQ4 1221 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 DDHD1Q8NEL9 900 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 OR5AK3PQ8NH89 298 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 HUS1BQ8NHY5 278 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 SLC47A1Q96FL8 570 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 SECISBP2Q96T21 854 aaKnown RBP10.41□□□□□ -0.74
NEDD9-201ENST00000379433 TRMT61BQ9BVS5 477 aaKnown RBP10.41□□□□□ -0.74
NEDD9-201ENST00000379433 TMEM245Q9H330 911 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 ZMIZ1Q9ULJ6 1067 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 PPIL1Q9Y3C6 166 aa10.41□□□□□ -0.74
NEDD9-201ENST00000379433 GBF1Q92538 1859 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 MAGEA13PA6NCF6 341 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 C1QTNF3-AMACRE9PGA6 284 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 H0Y8X5 98 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 PLOD2O00469 737 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 ASLP04424 464 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 PRKACGP22612 351 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 GSSP48637 474 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 ERVK-21P61565 698 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 TFF2Q03403 129 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 COTL1Q14019 142 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 SGCAQ16586 387 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 GAB4Q2WGN9 574 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 TMEM259Q4ZIN3 620 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 PYCR3Q53H96 274 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 PLEKHS1Q5SXH7 462 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 ANKRD34AQ69YU3 496 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 NOXRED1Q6NXP6 359 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 BEND4Q6ZU67 534 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 GPR180Q86V85 440 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 STX12Q86Y82 276 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 MMP21Q8N119 569 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 CPA6Q8N4T0 437 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 ZNF557Q8N988 423 aaPredicted RBP10.4□□□□□ -0.74
NEDD9-201ENST00000379433 SLC9A6Q92581 669 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 BIRC7Q96CA5 298 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 FAM120BQ96EK7 910 aaKnown RBP10.4□□□□□ -0.74
NEDD9-201ENST00000379433 REXO4Q9GZR2 422 aaKnown RBP10.4□□□□□ -0.74
NEDD9-201ENST00000379433 SPNS1Q9H2V7 528 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 HEBP1Q9NRV9 189 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 MARK1Q9P0L2 795 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 NFKBIL1Q9UBC1 381 aaPredicted RBP10.4□□□□□ -0.74
NEDD9-201ENST00000379433 ADGRE2Q9UHX3 823 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 BAG5Q9UL15 447 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 HCN2Q9UL51 889 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 PCDHA9Q9Y5H5 950 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 KCNE2Q9Y6J6 123 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 SEC16AO15027 2179 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 IGLV3-16A0A075B6K0 115 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 A0A0J9YVX5 310 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 MGAT4DA6NG13 374 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 VSTM5A8MXK1 200 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 AREL1O15033 823 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 EEDO75530 441 aaKnown RBP10.4□□□□□ -0.74
NEDD9-201ENST00000379433 OR6B1O95007 311 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 KRT75O95678 551 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 SOD1P00441 154 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 SRPRAP08240 638 aaKnown RBP10.4□□□□□ -0.74
NEDD9-201ENST00000379433 ANXA4P09525 319 aaPredicted RBP10.4□□□□□ -0.74
NEDD9-201ENST00000379433 PRR35P0CG20 571 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 FASP25445 335 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 GSTT1P30711 240 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 SOX6P35712 828 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 ARFIP1P53367 373 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 CDH15P55291 814 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 CARD18P57730 90 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 ELP6Q0PNE2 266 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 SPIDRQ14159 915 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 OGFRL1Q5TC84 451 aaPredicted RBP10.4□□□□□ -0.74
NEDD9-201ENST00000379433 KIAA1324Q6UXG2 1013 aaKnown RBP10.4□□□□□ -0.74
NEDD9-201ENST00000379433 MINDY1Q8N5J2 469 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 ZNF527Q8NB42 609 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 MAL2Q969L2 176 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 METTL2AQ96IZ6 378 aaKnown RBP10.4□□□□□ -0.74
NEDD9-201ENST00000379433 CHID1Q9BWS9 393 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 GRIP2Q9C0E4 1043 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 PITHD1Q9GZP4 211 aaPredicted RBP10.4□□□□□ -0.74
NEDD9-201ENST00000379433 C12orf10Q9HB07 376 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 TAC3Q9UHF0 121 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 CDH7Q9ULB5 785 aa10.4□□□□□ -0.74
NEDD9-201ENST00000379433 RBMX2Q9Y388 322 aaKnown RBP10.4□□□□□ -0.74
NEDD9-201ENST00000379433 TDRD6O60522 2096 aaKnown RBP10.4□□□□□ -0.74
NEDD9-201ENST00000379433 PRSS51A0A1B0GVH4 220 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 MYO1GB0I1T2 1018 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 C5orf67F2Z3F1 127 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 EI24O14681 340 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 NOBOXO60393 691 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 DNAJB5O75953 348 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 IFNA14P01570 189 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 APODP05090 189 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 CBSLP0DN79 551 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 NAGAP17050 411 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 ITGB7P26010 798 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 CBSP35520 551 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 ATP4BP51164 291 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 PRKCQQ04759 706 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 HYAL1Q12794 435 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 SLC14A1Q13336 389 aa10.4□□□□□ -0.75
NEDD9-201ENST00000379433 PDCD4Q53EL6 469 aaKnown RBP10.4□□□□□ -0.75
NEDD9-201ENST00000379433 ZDHHC20Q5W0Z9 365 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms