RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 CAPN14A8MX76 684 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 GADD45GO95257 159 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 ANGPTL1O95841 491 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 IL3P08700 152 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 CD9P21926 228 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 GSTM5P46439 218 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 PXNP49023 591 aaPredicted RBP13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 ARRB1P49407 418 aaPredicted RBP13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 DAG1Q14118 895 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 CDKL4Q5MAI5 379 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 OR52E8Q6IFG1 317 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 UNC5DQ6UXZ4 953 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 CHRDL2Q6WN34 429 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 ATG14Q6ZNE5 492 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 ERMP1Q7Z2K6 904 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 OR8H2Q8N162 312 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 SVOPLQ8N434 492 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 MINDY1Q8N5J2 469 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 TEX47Q8TBZ9 253 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 ZFAND2BQ8WV99 257 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 RAB8BQ92930 207 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 ARRDC3Q96B67 414 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 PHF21AQ96BD5 680 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 VN1R3Q9BXE9 311 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 SCN4AP35499 1836 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 ZNFX1Q9P2E3 1918 aaKnown RBP13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 H3BNH8 94 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 UGT2B11O75310 529 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 PBX2P40425 430 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 CLCN7P51798 805 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 LASP1Q14847 261 aaKnown RBP13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 RNF44Q7L0R7 432 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 GPR149Q86SP6 731 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 PDSS2Q86YH6 399 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 EPHX4Q8IUS5 362 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 DPP10Q8N608 796 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 PDPRQ8NCN5 879 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 WDR48Q8TAF3 677 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 Q96MT0 163 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 BCHEP06276 602 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 SOX6P35712 828 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 MERTKQ12866 999 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 GPR153Q6NV75 609 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 TMEM207Q6UWW9 146 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 AMIGO1Q86WK6 493 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 PEX5LQ8IYB4 626 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 VN1R2Q8NFZ6 395 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 ISL2Q96A47 359 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 NEUROD4Q9HD90 331 aa13.66□□□□□ -0.22
SHROOM1-203ENST00000378679 A0A1W2PPW3 197 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 KPNA4O00629 521 aaPredicted RBP13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 CAPGP40121 348 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 GUCA1AP43080 201 aaPredicted RBP13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 CDK3Q00526 305 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 GANABQ14697 944 aaKnown RBP13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 TLR1Q15399 786 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 PNCKQ6P2M8 343 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 ABHD13Q7L211 337 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 FBXO15Q8NCQ5 510 aaPredicted RBP13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 OR5K1Q8NHB7 308 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 MYDGFQ969H8 173 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 GAL3ST4Q96RP7 486 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 FBRSQ9HAH7 460 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 PRSS16Q9NQE7 514 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 ZC4H2Q9NQZ6 224 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 SOBPA7XYQ1 873 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 EEDO75530 441 aaKnown RBP13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 MATN4O95460 622 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 PEX11BO96011 259 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 JUNDP17535 347 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 CCNA2P20248 432 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 CD247P20963 164 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 HNRNPA2B1P22626 353 aaKnown RBP13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 JAK1P23458 1154 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 PIK3CBP42338 1070 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 KHKP50053 298 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 OR4D2P58180 307 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 RPL6Q02878 288 aaKnown RBP13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 RPA4Q13156 261 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 CCNIQ14094 377 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 LILRA6Q6PI73 481 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 LMNTD1Q8N9Z9 388 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 NFKBIDQ8NI38 313 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 NEIL2Q969S2 332 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 NXPE3Q969Y0 559 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 ZUFSPQ96AP4 578 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 DPYSL5Q9BPU6 564 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 UBAP1Q9NZ09 502 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 ERGIC3Q9Y282 383 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 OR6C74A6NCV1 312 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 DUXAA6NLW8 204 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 P2RY2P41231 377 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 OR2T5Q6IEZ7 315 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 SLC9B2Q86UD5 537 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 RNF130Q86XS8 419 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 OR2T29Q8NH02 315 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 OCEL1Q9H607 264 aa13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 SOX17Q9H6I2 414 aaPredicted RBP13.65□□□□□ -0.22
SHROOM1-203ENST00000378679 TAS2R9Q9NYW1 312 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms