RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 LHX8Q68G74 356 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 KIAA1161Q6NSJ0 714 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 SMARCD3Q6STE5 483 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 TMIGD1Q6UXZ0 262 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 RANBP10Q6VN20 620 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 NAPRTQ6XQN6 538 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 TOMM5Q8N4H5 51 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 MAPK15Q8TD08 544 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 KBTBD7Q8WVZ9 684 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 OVCA2Q8WZ82 227 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 PGAP3Q96FM1 320 aaPredicted RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 RIOK2Q9BVS4 552 aaKnown RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 MKKSQ9NPJ1 570 aaPredicted RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 SDR39U1Q9NRG7 319 aaPredicted RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 EXOSC1Q9Y3B2 195 aaKnown RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 PLOD2O00469 737 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 SLC16A5O15375 505 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 TLX2O43763 284 aaPredicted RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 MRPS14O60783 128 aaKnown RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 ADAMTS4O75173 837 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 BCHEP06276 602 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 KLK1P06870 262 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 C8AP07357 584 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 HAPLN1P10915 354 aaPredicted RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 BCKDHAP12694 445 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 NDUFS1P28331 727 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 PSMD8P48556 350 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 CDH11P55287 796 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 RPP38P78345 283 aaKnown RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 DSG2Q14126 1118 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 OR52E8Q6IFG1 317 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 MSANTD1Q6ZTZ1 278 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 GPR135Q8IZ08 494 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 C1orf216Q8TAB5 229 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 ZNF675Q8TD23 568 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 CDADC1Q9BWV3 514 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 ASPNQ9BXN1 380 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 EIF3KQ9UBQ5 218 aaKnown RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 ST14Q9Y5Y6 855 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 XIRP2A4UGR9 3374 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 MYOCOSA0A1B0GUC4 107 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 FBP2O00757 339 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 B3GALT2O43825 422 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 RAB36O95755 333 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 RB1P06400 928 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 CCL5P13501 91 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 RYKP34925 604 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 OR4D2P58180 307 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 TAS2R43P59537 309 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 ADAM8P78325 824 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 PTGR1Q14914 329 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 SMU1Q2TAY7 513 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 SLC30A6Q6NXT4 461 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 ZCCHC12Q6PEW1 402 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 TSPYL5Q86VY4 417 aaPredicted RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 CMTR2Q8IYT2 770 aaKnown RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 SLAIN1Q8ND83 568 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 CCDC107Q8WV48 283 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 NSUN5Q96P11 429 aaKnown RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 MYOCQ99972 504 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 NDC1Q9BTX1 674 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 DOHHQ9BU89 302 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 REEP4Q9H6H4 257 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 MRPS30Q9NP92 439 aaKnown RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 CTPS2Q9NRF8 586 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 CMAHPQ9Y471 501 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 OARD1Q9Y530 152 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 SOCS2O14508 198 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 ZNF623O75123 536 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 PPP5CP53041 499 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 CLDN8P56748 225 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 MS4A2Q01362 244 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 TCEAL5Q5H9L2 206 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 GPRC6AQ5T6X5 926 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 PRPF38BQ5VTL8 546 aaKnown RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 IRAK1BP1Q5VVH5 260 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 QSOX2Q6ZRP7 698 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 LINGO2Q7L985 606 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 ISCA2Q86U28 154 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 ZSWIM9Q86XI8 627 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 OR8H3Q8N146 312 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 KREMEN2Q8NCW0 462 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 OR56A1Q8NGH5 318 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 PXYLP1Q8TE99 480 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 TMEM203Q969S6 136 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 C12orf66Q96MD2 445 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 C5orf34Q96MH7 638 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 ZNF778Q96MU6 729 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 DUS2Q9NX74 493 aaKnown RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 SPEF1Q9Y4P9 236 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 PCDHGA7Q9Y5G6 932 aa8.11□□□□□ -1.11
VPS36-201ENST00000378060 MYO18AQ92614 2054 aaKnown RBP8.11□□□□□ -1.11
VPS36-201ENST00000378060 FAM170BA6NMN3 283 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 SLC1A7O00341 560 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 NME4O00746 187 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 MT-ND2P03891 347 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 DDX6P26196 483 aaKnown RBP eCLIP8.1□□□□□ -1.11
VPS36-201ENST00000378060 IGFALSP35858 605 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 DNASE1L1P49184 302 aa8.1□□□□□ -1.11
VPS36-201ENST00000378060 TAS2R50P59544 299 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms