RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 GABARAPO95166 117 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 C6orf47O95873 294 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 AGR2O95994 175 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 BMP1P13497 986 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 F8A1P23610 371 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 AGAP6Q5VW22 663 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 TNFAIP8L2Q6P589 184 aaPredicted RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 TPRG1Q6ZUI0 275 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 DCAF4L2Q8NA75 395 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 ASB15Q8WXK1 588 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 AGAP4Q96P64 663 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 PKP4Q99569 1192 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 CORO1BQ9BR76 489 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 SUV39H2Q9H5I1 410 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 CCSER2Q9H7U1 834 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 NKIRAS2Q9NYR9 191 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 DNAJC27Q9NZQ0 273 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 MYH14Q7Z406 1995 aaKnown RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 FAM47E-STBD1D6RA91 191 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 HIST1H2ABP04908 130 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 HAPLN1P10915 354 aaPredicted RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 LRRC66Q68CR7 880 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 PSAPL1Q6NUJ1 521 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 LETMD1Q6P1Q0 360 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 TMEM220Q6QAJ8 160 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 HIST3H2AQ7L7L0 130 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 RETREG3Q86VR2 466 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 SAMD14Q8IZD0 417 aaPredicted RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 PSD4Q8NDX1 1056 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 OR8J1Q8NGP2 316 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 LILRB4Q8NHJ6 448 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 HIST1H2ACQ93077 130 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 RFT1Q96AA3 541 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 BARD1Q99728 777 aaKnown RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 TMEM175Q9BSA9 504 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 LMAN2LQ9H0V9 348 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 OCEL1Q9H607 264 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 FOLH1BQ9HBA9 442 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 THG1LQ9NWX6 298 aaKnown RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 RABL2AQ9UBK7 228 aaPredicted RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 UBQLN2Q9UHD9 624 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 RABL2BQ9UNT1 228 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 LTBP3Q9NS15 1303 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 COL24A1Q17RW2 1714 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 FOCADQ5VW36 1801 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 A8MV72 311 aaPredicted RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 KELP23276 732 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 WEE1P30291 646 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 PCGF2P35227 344 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 EIF2B5Q13144 721 aaKnown RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 MICAQ29983 383 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 PJA1Q8NG27 643 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 CD200R1Q8TD46 325 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 IGSF8Q969P0 613 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 RAD51AP1Q96B01 352 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 ZNF514Q96K75 400 aaPredicted RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 NELL2Q99435 816 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 TTYH2Q9BSA4 534 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 SYNDIG1Q9H7V2 258 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 TXNRD2Q9NNW7 524 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 ERVK13-1Q9NX77 482 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 CNOT2Q9NZN8 540 aaKnown RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 TSPAN4O14817 238 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 MID1O15344 667 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 ADAP00813 363 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 PRLP01236 227 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 ATXN8OSP0DMR3 200 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 VIPR1P32241 457 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 EIF2DP41214 584 aaKnown RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 ARFIP1P53367 373 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 BTG3Q14201 252 aaPredicted RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 SPHARQ15513 63 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 ADGRD2Q7Z7M1 963 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 NOXA1Q86UR1 476 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 FBXO22Q8NEZ5 403 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 PYCR2Q96C36 320 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 ZBED3Q96IU2 234 aaPredicted RBP8.47□□□□□ -1.05
PCDH9-202ENST00000377865 HYLS1Q96M11 299 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 CLMPQ9H6B4 373 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 RDH14Q9HBH5 336 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 GPR83Q9NYM4 423 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 ITM2BQ9Y287 266 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 MAB21L2Q9Y586 359 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 STON1Q9Y6Q2 735 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 A3GALT2U3KPV4 340 aa8.47□□□□□ -1.05
PCDH9-202ENST00000377865 MYH9P35579 1960 aaKnown RBP8.46□□□□□ -1.05
PCDH9-202ENST00000377865 LOC285095A0A1B0GVY8 99 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 C12orf71A8MTZ7 269 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 I3L521 148 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 CAPN5O15484 640 aaPredicted RBP8.46□□□□□ -1.05
PCDH9-202ENST00000377865 B4GAT1O43505 415 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 TLX2O43763 284 aaPredicted RBP8.46□□□□□ -1.05
PCDH9-202ENST00000377865 FUCA1P04066 466 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 GABRR2P28476 465 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 CASP3P42574 277 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 RPS5P46782 204 aaKnown RBP8.46□□□□□ -1.05
PCDH9-202ENST00000377865 TPGS2Q68CL5 300 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 FAM171BQ6P995 826 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 CEACAM20Q6UY09 585 aa8.46□□□□□ -1.05
PCDH9-202ENST00000377865 CYP4V2Q6ZWL3 525 aaPredicted RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms