RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 ATP13A2Q9NQ11 1180 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 SNX8Q9Y5X2 465 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 IGLV3-16A0A075B6K0 115 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 SERTM1A2A2V5 107 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 MEIOCA2RUB1 952 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 FAM25AB3EWG3 89 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 FAM25CB3EWG5 89 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 FAM25GB3EWG6 89 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 ACPPP15309 386 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 ENGP17813 658 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 WNT3P56703 355 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 VLDLRP98155 873 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 LMAN2Q12907 356 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 STARD3Q14849 445 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 DUOXA1Q1HG43 343 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 VMACQ2NL98 169 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 GPR155Q7Z3F1 870 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 VTCN1Q7Z7D3 282 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 PTOV1Q86YD1 416 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 ZNF334Q9HCZ1 680 aaPredicted RBP13.34□□□□□ -0.27
SF1-205ENST00000377394 NMRK2Q9NPI5 230 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 TMPRSS11EQ9UL52 423 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 NDRG4Q9ULP0 352 aaKnown RBP13.34□□□□□ -0.27
SF1-205ENST00000377394 GMPPBQ9Y5P6 360 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 PLXNB3Q9ULL4 1909 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 MYO1GB0I1T2 1018 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 LOC110117498-PIK3R3F6TDL0 507 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 CLIC1O00299 241 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 IGSF6O95976 241 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 C8GP07360 202 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 SERPINA4P29622 427 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 DNAJA1P31689 397 aaKnown RBP13.34□□□□□ -0.27
SF1-205ENST00000377394 UQCRC1P31930 480 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 UGT2B10P36537 528 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 CTSKP43235 329 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 CRISP3P54108 245 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 SNRPD2P62316 118 aaKnown RBP13.34□□□□□ -0.27
SF1-205ENST00000377394 HSPA14Q0VDF9 509 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 KRR1Q13601 381 aaKnown RBP13.34□□□□□ -0.27
SF1-205ENST00000377394 UGT8Q16880 541 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 ZMAT1Q5H9K5 638 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 SPANXN2Q5MJ10 180 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 FRG2Q64ET8 278 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 LHX8Q68G74 356 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 TXNDC8Q6A555 127 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 TPRG1Q6ZUI0 275 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 CCDC71Q8IV32 467 aaPredicted RBP13.34□□□□□ -0.27
SF1-205ENST00000377394 SCRN2Q96FV2 425 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 IGSF21Q96ID5 467 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 FRG2BQ96QU4 278 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 P2RY13Q9BPV8 354 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 NXF2Q9GZY0 626 aaKnown RBP13.34□□□□□ -0.27
SF1-205ENST00000377394 SLC22A14Q9Y267 594 aa13.34□□□□□ -0.27
SF1-205ENST00000377394 FPGTO14772 594 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 AKR7A2O43488 359 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 OLFM2O95897 454 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 FABP3P05413 133 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 YES1P07947 543 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 GPX2P18283 190 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 FPR1P21462 350 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 LHCGRP22888 699 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 AZGP1P25311 298 aaKnown RBP13.33□□□□□ -0.28
SF1-205ENST00000377394 PKLRP30613 574 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 CD70P32970 193 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 KDELR2P33947 212 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 FCHO2Q0JRZ9 810 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 TAB1Q15750 504 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 TPGS2Q68CL5 300 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 RAB43Q86YS6 212 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 OR2AP1Q8NGE2 309 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 CCDC120Q96HB5 630 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 CHCHD6Q9BRQ6 235 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 EBPLQ9BY08 206 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 ABCB8Q9NUT2 735 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 TMEM39AQ9NV64 488 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 UPK3BL1B0FP48 263 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 B8ZZF3 427 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 UPK3BL2E5RIL1 263 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 PRPS1L1P21108 318 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 ITPKAP23677 461 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 HNMTP50135 292 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 ARHGDIAP52565 204 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 POU6F2P78424 691 aaPredicted RBP13.33□□□□□ -0.28
SF1-205ENST00000377394 VEPH1Q14D04 833 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 MAD2L1BPQ15013 274 aaPredicted RBP13.33□□□□□ -0.28
SF1-205ENST00000377394 FAM205BPQ63HN1 556 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 TTC29Q8NA56 475 aaPredicted RBP13.33□□□□□ -0.28
SF1-205ENST00000377394 ECHDC3Q96DC8 303 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 TRNT1Q96Q11 434 aaKnown RBP13.33□□□□□ -0.28
SF1-205ENST00000377394 PANX1Q96RD7 426 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 C12orf4Q9NQ89 552 aa13.33□□□□□ -0.28
SF1-205ENST00000377394 PDP1Q9P0J1 537 aaPredicted RBP13.33□□□□□ -0.28
SF1-205ENST00000377394 E9PQ18 207 aa13.32□□□□□ -0.28
SF1-205ENST00000377394 GFYI3L273 518 aa13.32□□□□□ -0.28
SF1-205ENST00000377394 YY2O15391 372 aa13.32□□□□□ -0.28
SF1-205ENST00000377394 OR56A5P0C7T3 313 aa13.32□□□□□ -0.28
SF1-205ENST00000377394 PCSK2P16519 638 aa13.32□□□□□ -0.28
SF1-205ENST00000377394 CTSOP43234 321 aaPredicted RBP13.32□□□□□ -0.28
SF1-205ENST00000377394 IQCCQ4KMZ1 466 aa13.32□□□□□ -0.28
SF1-205ENST00000377394 SYCE2Q6PIF2 218 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms