RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 KLHL42Q9P2K6 505 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 SH2B3Q9UQQ2 575 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 HS3ST2Q9Y278 367 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 ITM2BQ9Y287 266 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 CAB39Q9Y376 341 aaPredicted RBP17.42■□□□□ 0.38
SF1-203ENST00000377387 AQP9O43315 295 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 HOXB6P17509 224 aaKnown RBP17.42■□□□□ 0.38
SF1-203ENST00000377387 IMPA1P29218 277 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 SOAT1P35610 550 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 SELENOWP63302 87 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 TTC23LQ6PF05 361 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 LGI4Q8N135 537 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 FAM83FQ8NEG4 500 aaPredicted RBP17.42■□□□□ 0.38
SF1-203ENST00000377387 OR2A12Q8NGT7 310 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 RHOXF1Q8NHV9 184 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 IPCEF1Q8WWN9 437 aaPredicted RBP17.42■□□□□ 0.38
SF1-203ENST00000377387 SLC35A5Q9BS91 424 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 OGDHLQ9ULD0 1010 aa17.42■□□□□ 0.38
SF1-203ENST00000377387 PRAMEF25A6NGN4 478 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 TLL1O43897 1013 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 LRG1P02750 347 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 SP140Q13342 867 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 GPR155Q7Z3F1 870 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 MMP21Q8N119 569 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 POC5Q8NA72 575 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 ABHD8Q96I13 439 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 OSGIN1Q9UJX0 560 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 EXO1Q9UQ84 846 aaKnown RBP17.41■□□□□ 0.38
SF1-203ENST00000377387 TRAV19A0A0A6YYK7 116 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 PCDH17O14917 1159 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 TGM5O43548 720 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 PRMT3O60678 531 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 CNOT3O75175 753 aaKnown RBP17.41■□□□□ 0.38
SF1-203ENST00000377387 XPAP23025 273 aaPredicted RBP17.41■□□□□ 0.38
SF1-203ENST00000377387 CTSKP43235 329 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 ELP6Q0PNE2 266 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 DMC1Q14565 340 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 ZNF404Q494X3 552 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 TMEM220Q6QAJ8 160 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 ZNF605Q86T29 641 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 SLC39A11Q8N1S5 342 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 PGBD3Q8N328 593 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 POP5Q969H6 163 aaKnown RBP17.41■□□□□ 0.38
SF1-203ENST00000377387 Q96MT0 163 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 EPYCQ99645 322 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 PITX2Q99697 317 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 WRAP53Q9BUR4 548 aaKnown RBP17.41■□□□□ 0.38
SF1-203ENST00000377387 IMPAD1Q9NX62 359 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 PSORS1C1Q9UIG5 152 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 FAM227AF5H4B4 570 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 EIF3FO00303 357 aaPredicted RBP17.41■□□□□ 0.38
SF1-203ENST00000377387 PITPNM1O00562 1244 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 GRM6O15303 877 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 CCL16O15467 120 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 PTHP01270 115 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 CATP04040 527 aaKnown RBP17.41■□□□□ 0.38
SF1-203ENST00000377387 GSTM1P09488 218 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 GRK3P35626 688 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 GGT2P36268 569 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 RPS3AP61247 264 aaKnown RBP17.41■□□□□ 0.38
SF1-203ENST00000377387 DEFB103AP81534 67 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 ST3GAL4Q11206 333 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 GRHL2Q6ISB3 625 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 WDR48Q8TAF3 677 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 ZNF675Q8TD23 568 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 FCRL1Q96LA6 429 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 EMILIN2Q9BXX0 1053 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 CHST8Q9H2A9 424 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 SPG21Q9NZD8 308 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 SCHIP1Q9P0W5 487 aaPredicted RBP17.41■□□□□ 0.38
SF1-203ENST00000377387 RAB23Q9ULC3 237 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 DUSP12Q9UNI6 340 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 PPIL1Q9Y3C6 166 aa17.41■□□□□ 0.38
SF1-203ENST00000377387 SLC16A5O15375 505 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 DLGAP3O95886 979 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 CHI3L1P36222 383 aaPredicted RBP17.4■□□□□ 0.38
SF1-203ENST00000377387 TPTEP56180 551 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 POLR2LP62875 67 aaKnown RBP17.4■□□□□ 0.38
SF1-203ENST00000377387 C2orf80Q0P641 193 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 SCARB2Q14108 478 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 RNF130Q86XS8 419 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 CPXM2Q8N436 756 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 DNAJC22Q8N4W6 341 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 CENPOQ9BU64 300 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 SORBS1Q9BX66 1292 aaKnown RBP17.4■□□□□ 0.38
SF1-203ENST00000377387 SNX8Q9Y5X2 465 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 PCM1Q15154 2024 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 KPNA5O15131 536 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 SLCO2B1O94956 709 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 ZNF8P17098 575 aaPredicted RBP17.4■□□□□ 0.38
SF1-203ENST00000377387 HNF4AP41235 474 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 PPP5CP53041 499 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 DEFB115Q30KQ5 88 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 METTL3Q86U44 580 aaKnown RBP17.4■□□□□ 0.38
SF1-203ENST00000377387 CACTIN-AS1Q8N1I8 211 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 BCL7BQ9BQE9 202 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 MS4A12Q9NXJ0 267 aa17.4■□□□□ 0.38
SF1-203ENST00000377387 CLDN24A6NM45 220 aa17.39■□□□□ 0.37
SF1-203ENST00000377387 CLCA1A8K7I4 914 aa17.39■□□□□ 0.37
SF1-203ENST00000377387 PABPC1P11940 636 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms