RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 FOXM1Q08050 763 aa20.27■□□□□ 0.84
CBWD3-202ENST00000377342 DEPDC1Q5TB30 811 aa20.27■□□□□ 0.84
CBWD3-202ENST00000377342 PRAMEF17Q5VTA0 474 aa20.27■□□□□ 0.84
CBWD3-202ENST00000377342 TMPRSS12Q86WS5 348 aa20.27■□□□□ 0.84
CBWD3-202ENST00000377342 HOMEZQ8IX15 550 aa20.27■□□□□ 0.84
CBWD3-202ENST00000377342 ZCCHC10Q8TBK6 192 aa20.27■□□□□ 0.84
CBWD3-202ENST00000377342 SERPINI1Q99574 410 aa20.27■□□□□ 0.84
CBWD3-202ENST00000377342 CCT7Q99832 543 aa20.27■□□□□ 0.84
CBWD3-202ENST00000377342 MRPL1Q9BYD6 325 aaKnown RBP20.27■□□□□ 0.84
CBWD3-202ENST00000377342 REXO4Q9GZR2 422 aaKnown RBP20.27■□□□□ 0.84
CBWD3-202ENST00000377342 FAM107BQ9H098 131 aa20.27■□□□□ 0.84
CBWD3-202ENST00000377342 EPN3Q9H201 632 aa20.27■□□□□ 0.84
CBWD3-202ENST00000377342 DCTN4Q9UJW0 460 aa20.27■□□□□ 0.84
CBWD3-202ENST00000377342 CCDC187A0A096LP49 1063 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 TRPC5OSA6NMA1 111 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 B4E171 279 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 PLPP1O14494 284 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 ZSCAN9O15535 394 aaPredicted RBP20.26■□□□□ 0.83
CBWD3-202ENST00000377342 PRR35P0CG20 571 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 PTX3P26022 381 aaPredicted RBP20.26■□□□□ 0.83
CBWD3-202ENST00000377342 EPHA3P29320 983 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 TSPAN7P41732 249 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 MC2RQ01718 297 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 SF3A3Q12874 501 aaKnown RBP eCLIP20.26■□□□□ 0.83
CBWD3-202ENST00000377342 TARDBPQ13148 414 aaKnown RBP eCLIP20.26■□□□□ 0.83
CBWD3-202ENST00000377342 NR6A1Q15406 480 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 RAB11FIP2Q7L804 512 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 DTWD1Q8N5C7 304 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 C11orf24Q96F05 449 aaPredicted RBP20.26■□□□□ 0.83
CBWD3-202ENST00000377342 APIPQ96GX9 242 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 OR52B2Q96RD2 323 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 VPS29Q9UBQ0 182 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 GOLGA8QA0A0J9YX86 632 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 GOLGA8OA6NCC3 632 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 GOLGA8NF8WBI6 632 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 ERI3O43414 337 aaKnown RBP20.26■□□□□ 0.83
CBWD3-202ENST00000377342 RGS14O43566 566 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 DIAPH2O60879 1101 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 SEMA3DO95025 777 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 B3GALT4O96024 378 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 ZNF888P0CJ79 500 aaPredicted RBP20.26■□□□□ 0.83
CBWD3-202ENST00000377342 SMIM10L1P0DMW3 83 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 TROVE2P10155 538 aaKnown RBP eCLIP20.26■□□□□ 0.83
CBWD3-202ENST00000377342 FGF5P12034 268 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 IDH3AP50213 366 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 IMPG1Q17R60 797 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 MANEAQ5SRI9 462 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 PRSS41Q7RTY9 318 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 ZNF655Q8N720 491 aaPredicted RBP20.26■□□□□ 0.83
CBWD3-202ENST00000377342 OR2L5Q8NG80 312 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 UTP15Q8TED0 518 aaKnown RBP20.26■□□□□ 0.83
CBWD3-202ENST00000377342 GAL3ST3Q96A11 431 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 SMIM10Q96HG1 83 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 CTRCQ99895 268 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 SIKE1Q9BRV8 207 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 SORBS1Q9BX66 1292 aaKnown RBP20.26■□□□□ 0.83
CBWD3-202ENST00000377342 PRM3Q9NNZ6 103 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 IRAK4Q9NWZ3 460 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 RARRES3Q9UL19 164 aa20.26■□□□□ 0.83
CBWD3-202ENST00000377342 SEC16AO15027 2179 aa20.25■□□□□ 0.83
CBWD3-202ENST00000377342 A0A0G2JN53 185 aa20.25■□□□□ 0.83
CBWD3-202ENST00000377342 RTCAO00442 366 aaKnown RBP20.25■□□□□ 0.83
CBWD3-202ENST00000377342 STXBP1P61764 594 aaKnown RBP20.25■□□□□ 0.83
CBWD3-202ENST00000377342 KIAA0040Q15053 153 aa20.25■□□□□ 0.83
CBWD3-202ENST00000377342 TMEM35AQ53FP2 167 aa20.25■□□□□ 0.83
CBWD3-202ENST00000377342 CHSY3Q70JA7 882 aa20.25■□□□□ 0.83
CBWD3-202ENST00000377342 LARP4Q71RC2 724 aaKnown RBP eCLIP20.25■□□□□ 0.83
CBWD3-202ENST00000377342 C10orf82Q8WW14 230 aa20.25■□□□□ 0.83
CBWD3-202ENST00000377342 C17orf62Q9BQA9 187 aa20.25■□□□□ 0.83
CBWD3-202ENST00000377342 NLNQ9BYT8 704 aa20.25■□□□□ 0.83
CBWD3-202ENST00000377342 NSRP1Q9H0G5 558 aaKnown RBP20.25■□□□□ 0.83
CBWD3-202ENST00000377342 AKTIPQ9H8T0 292 aa20.25■□□□□ 0.83
CBWD3-202ENST00000377342 FBXO8Q9NRD0 319 aa20.25■□□□□ 0.83
CBWD3-202ENST00000377342 AKAP7Q9P0M2 348 aaPredicted RBP20.25■□□□□ 0.83
CBWD3-202ENST00000377342 KLHL14Q9P2G3 628 aa20.25■□□□□ 0.83
CBWD3-202ENST00000377342 A0A0G2JND7 137 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 HYKKA2RU49 373 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 TXNDC9O14530 226 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 RAB8AP61006 207 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 EIF3IQ13347 325 aaKnown RBP20.24■□□□□ 0.83
CBWD3-202ENST00000377342 IL11RAQ14626 422 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 GRM7Q14831 915 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 PWWP2BQ6NUJ5 590 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 ABHD17CQ6PCB6 329 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 ZNF793Q6ZN11 406 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 TMPRSS7Q7RTY8 843 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 PPP1R3BQ86XI6 285 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 GPR135Q8IZ08 494 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 METTL4Q8N3J2 472 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 C1orf52Q8N6N3 182 aaKnown RBP20.24■□□□□ 0.83
CBWD3-202ENST00000377342 OR8K5Q8NH50 307 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 STON2Q8WXE9 905 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 TUBGCP3Q96CW5 907 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 RNF31Q96EP0 1072 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 TEFMQ96QE5 360 aaKnown RBP20.24■□□□□ 0.83
CBWD3-202ENST00000377342 TMEM120AQ9BXJ8 343 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 LRTM1Q9HBL6 345 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 RIC8BQ9NVN3 520 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 SERTAD3Q9UJW9 196 aa20.24■□□□□ 0.83
CBWD3-202ENST00000377342 SATB2Q9UPW6 733 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms