RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 ZNF160Q9HCG1 818 aa20.91■□□□□ 0.94
SRM-201ENST00000376957 MED13Q9UHV7 2174 aa20.91■□□□□ 0.94
SRM-201ENST00000376957 TNPO3Q9Y5L0 923 aaKnown RBP20.91■□□□□ 0.94
SRM-201ENST00000376957 TLN1Q9Y490 2541 aaKnown RBP20.91■□□□□ 0.94
SRM-201ENST00000376957 K7EPI3 171 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 CLEC3AO75596 197 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 PDGFAP04085 211 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 ABHD2P08910 425 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 RBP1P09455 135 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 ZNF888P0CJ79 500 aaPredicted RBP20.9■□□□□ 0.94
SRM-201ENST00000376957 COL6A2P12110 1019 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 CSRP3P50461 194 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 KCNC4Q03721 635 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 TSNAXIP1Q2TAA8 658 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 RIPOR1Q6ZS17 1223 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 AFAP1L2Q8N4X5 818 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 EFCAB3Q8N7B9 438 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 EIF1ADQ8N9N8 165 aaKnown RBP20.9■□□□□ 0.94
SRM-201ENST00000376957 ANKRD53Q8N9V6 530 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 MOCOSQ96EN8 888 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 TUBB6Q9BUF5 446 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 SLC6A16Q9GZN6 736 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 ZNF552Q9H707 407 aaPredicted RBP20.9■□□□□ 0.94
SRM-201ENST00000376957 TMCO1Q9UM00 188 aa20.9■□□□□ 0.94
SRM-201ENST00000376957 BOD1L1Q8NFC6 3051 aa20.89■□□□□ 0.94
SRM-201ENST00000376957 UBXN8O00124 270 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 WISP1O95388 367 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 ALDOAP04075 364 aaKnown RBP20.89■□□□□ 0.93
SRM-201ENST00000376957 HNF4AP41235 474 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 GLRBP48167 497 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 PIK3CGP48736 1102 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 ALDH18A1P54886 795 aaKnown RBP20.89■□□□□ 0.93
SRM-201ENST00000376957 DLG1Q12959 904 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 TBCCQ15814 346 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 TOR1AIP1Q5JTV8 583 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 METTL2BQ6P1Q9 378 aaKnown RBP20.89■□□□□ 0.93
SRM-201ENST00000376957 IGFL3Q6UXB1 125 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 PDSS2Q86YH6 399 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 CENPLQ8N0S6 344 aaPredicted RBP20.89■□□□□ 0.93
SRM-201ENST00000376957 SRFBP1Q8NEF9 429 aaKnown RBP20.89■□□□□ 0.93
SRM-201ENST00000376957 UTP15Q8TED0 518 aaKnown RBP20.89■□□□□ 0.93
SRM-201ENST00000376957 PNPLA2Q96AD5 504 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 ESAMQ96AP7 390 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 TBC1D20Q96BZ9 403 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 C8orf44Q96CB5 159 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 MTBPQ96DY7 904 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 PEX11GQ96HA9 241 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 VN1R1Q9GZP7 353 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 SPNS1Q9H2V7 528 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 COPG2Q9UBF2 871 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 ZNF462Q96JM2 2506 aa20.89■□□□□ 0.93
SRM-201ENST00000376957 LOC102723996A0A087X1L8 192 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 IGHV1-45A0A0A0MS14 117 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 A0A1W2PQ72 361 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 HMX2A2RU54 273 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 WFS1O76024 890 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 SNRPAP09012 282 aaKnown RBP20.88■□□□□ 0.93
SRM-201ENST00000376957 SERPINB1P30740 379 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 KCNC1P48547 511 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 IRF9Q00978 393 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 CHIT1Q13231 466 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 DOC2AQ14183 400 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 PFKFB4Q16877 469 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 FBXO48Q5FWF7 155 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 JMJD6Q6NYC1 403 aaPredicted RBP20.88■□□□□ 0.93
SRM-201ENST00000376957 TRIM40Q6P9F5 258 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 TMEM205Q6UW68 189 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 ATCAYQ86WG3 371 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.88■□□□□ 0.93
SRM-201ENST00000376957 UHMK1Q8TAS1 419 aaKnown RBP20.88■□□□□ 0.93
SRM-201ENST00000376957 UBTD2Q8WUN7 234 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 GAL3ST3Q96A11 431 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 WDR34Q96EX3 536 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 SCYL1Q96KG9 808 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 TRIM4Q9C037 500 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 ZNF700Q9H0M5 742 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 ADGRE2Q9UHX3 823 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 B3GNT3Q9Y2A9 372 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 SCN3AQ9NY46 2000 aa20.88■□□□□ 0.93
SRM-201ENST00000376957 TNRC6AQ8NDV7 1962 aaKnown RBP20.87■□□□□ 0.93
SRM-201ENST00000376957 ZNF860A6NHJ4 632 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 CHST10O43529 356 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 SERPINA7P05543 415 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 FHP07954 510 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 COX6A1P12074 109 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 RNH1P13489 461 aaKnown RBP20.87■□□□□ 0.93
SRM-201ENST00000376957 CASP2P42575 452 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 RAB8AP61006 207 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 EEF1A2Q05639 463 aaKnown RBP20.87■□□□□ 0.93
SRM-201ENST00000376957 ACTN3Q08043 901 aaPredicted RBP20.87■□□□□ 0.93
SRM-201ENST00000376957 RCN2Q14257 317 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 NSDHLQ15738 373 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 NADK2Q4G0N4 442 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 CRB2Q5IJ48 1285 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 ISLR2Q6UXK2 745 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 CPEB2Q7Z5Q1 589 aaKnown RBP20.87■□□□□ 0.93
SRM-201ENST00000376957 ARMC2Q8NEN0 867 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 CREB3L4Q8TEY5 395 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 LMF1Q96S06 567 aa20.87■□□□□ 0.93
SRM-201ENST00000376957 ROGDIQ9GZN7 287 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms