RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 ARG2P78540 354 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 CDKL1Q00532 357 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 Q0VFX4 171 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 ACAP2Q15057 778 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 TGFBIQ15582 683 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 ZNF630Q2M218 657 aaPredicted RBP11.54□□□□□ -0.56
LSM2-208ENST00000375661 FAM83EQ2M2I3 478 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 PRMT9Q6P2P2 845 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 AGTRAPQ6RW13 159 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 SUSD1Q6UWL2 747 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 LRIG3Q6UXM1 1119 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 LINC00696Q6ZRV3 163 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 GPSM1Q86YR5 675 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 FAM20CQ8IXL6 584 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 CATSPER1Q8NEC5 780 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 OR1N1Q8NGS0 311 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 OR2A1Q8NGT9 310 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 RHEBL1Q8TAI7 183 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 STAG3L4Q8TBR4 150 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 ACMSDQ8TDX5 336 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 SMPDL3AQ92484 453 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 HAS2Q92819 552 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 ZBTB9Q96C00 473 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 FBXL8Q96CD0 374 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 LURAP1Q96LR2 239 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 TRIM54Q9BYV2 358 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 ATG10Q9H0Y0 220 aa11.54□□□□□ -0.56
LSM2-208ENST00000375661 SOX17Q9H6I2 414 aaPredicted RBP11.54□□□□□ -0.56
LSM2-208ENST00000375661 NCF1BA6NI72 391 aaPredicted RBP11.53□□□□□ -0.56
LSM2-208ENST00000375661 ZNF839A8K0R7 811 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 NCF1CA8MVU1 366 aaPredicted RBP11.53□□□□□ -0.56
LSM2-208ENST00000375661 TAPBPO15533 448 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 KERAO60938 352 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 KLHL18O94889 574 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 CRYABP02511 175 aaKnown RBP11.53□□□□□ -0.56
LSM2-208ENST00000375661 ANXA5P08758 320 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 SBK3P0C264 359 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 MTHFD2P13995 350 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 NCF1P14598 390 aaPredicted RBP11.53□□□□□ -0.56
LSM2-208ENST00000375661 COX6B1P14854 86 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 ACPPP15309 386 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 PSMB5P28074 263 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 SOX11P35716 441 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 TNFSF10P50591 281 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 SLC18A2Q05940 514 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 NAE1Q13564 534 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 CASP8Q14790 479 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 C18orf21Q32NC0 220 aaPredicted RBP11.53□□□□□ -0.56
LSM2-208ENST00000375661 KRT71Q3SY84 523 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 TECRLQ5HYJ1 363 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 CEP85LQ5SZL2 805 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 FIGLAQ6QHK4 219 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 GFRALQ6UXV0 394 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 MRGPRGQ86SM5 289 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 TRABD2AQ86V40 505 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 KBTBD2Q8IY47 623 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 TMEM151AQ8N4L1 468 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 OR56A3Q8NH54 315 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 DNAJB8Q8NHS0 232 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 ZUFSPQ96AP4 578 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 RHBDF1Q96CC6 855 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 MAGEB10Q96LZ2 347 aaPredicted RBP11.53□□□□□ -0.56
LSM2-208ENST00000375661 CRB3Q9BUF7 120 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 RNF32Q9H0A6 362 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 TMEM216Q9P0N5 145 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 ABI3Q9P2A4 366 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 CTSFQ9UBX1 484 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 RNF112Q9ULX5 631 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 NCOA6Q14686 2063 aaPredicted RBP11.53□□□□□ -0.56
LSM2-208ENST00000375661 F8P00451 2351 aa11.53□□□□□ -0.56
LSM2-208ENST00000375661 A0A1W2PQ72 361 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 CCDC189A1A4V9 331 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 UBXN8O00124 270 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 AGAP20933 346 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 HTR1EP28566 365 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 CA7P43166 264 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 SLC6A12P48065 614 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 KCNK10P57789 538 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 TBPL1P62380 186 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 AP2B1P63010 937 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 OCA2Q04671 838 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 KLC1Q07866 573 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 TSTA3Q13630 321 aaPredicted RBP11.52□□□□□ -0.57
LSM2-208ENST00000375661 SF1Q15637 639 aaKnown RBP11.52□□□□□ -0.57
LSM2-208ENST00000375661 TSNAXIP1Q2TAA8 658 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 VWA2Q5GFL6 755 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 TNFAIP8L3Q5GJ75 292 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 CDKL4Q5MAI5 379 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 ATG9BQ674R7 924 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 KLC3Q6P597 504 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 XKRXQ6PP77 449 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 RIPOR1Q6ZS17 1223 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 SHISA6Q6ZSJ9 500 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 FRA10AC1Q70Z53 315 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 NDUFAF7Q7L592 441 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 C4orf33Q8N1A6 199 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 PDPRQ8NCN5 879 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 OR2L3Q8NG85 312 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 STT3BQ8TCJ2 826 aa11.52□□□□□ -0.57
LSM2-208ENST00000375661 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms