RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 PITPNM1O00562 1244 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 MMP20O60882 483 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 CD8BP10966 210 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 CPN2P22792 545 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 C22orf39Q6P5X5 142 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 OTOP2Q7RTS6 562 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 CNTN4Q8IWV2 1026 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 CMTM8Q8IZV2 173 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 DBF4BQ8NFT6 615 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 OR9Q2Q8NGE9 314 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 ARHGAP39Q9C0H5 1083 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 IGFBP6P24592 240 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 NFE2L1Q14494 772 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 NCEH1Q6PIU2 408 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 C17orf50Q8WW18 174 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 C12orf66Q96MD2 445 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 PCDHGB3Q9Y5G1 929 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TBC1D3DA0A087WVF3 549 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TBC1D3IA0A087WXS9 549 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TBC1D3EA0A087X179 549 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TBC1D3KA0A087X1G2 549 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 DAPL1A0PJW8 107 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TBC1D3FA6NER0 549 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TBC1D3LB9A6J9 549 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TLL1O43897 1013 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 BCAS1O75363 584 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 OXSR1O95747 527 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TBC1D3HP0C7X1 549 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 HLA-EP13747 358 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 ACADVLP49748 655 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF140P52738 457 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TUBA1BP68363 451 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 LMAN2Q12907 356 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TBC1D3GQ6DHY5 549 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 C22orf42Q6IC83 251 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TBC1D3CQ6IPX1 549 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 FRRS1Q6ZNA5 592 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TUBA1AQ71U36 451 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TBC1D3Q8IZP1 549 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TMEM121BQ9BXQ6 578 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 CCDC59Q9P031 241 aaKnown RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 POLR1DQ9Y2S0 133 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 FKBP7Q9Y680 259 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 ARID2Q68CP9 1835 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 GLTPD2A6NH11 291 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 PCP4L1A6NKN8 68 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 TSPAN6O43657 245 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 ORC5O43913 435 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF8P17098 575 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 DDX6P26196 483 aaKnown RBP eCLIP6.32□□□□□ -1.49e-13■□□□□ 8
SMC1A-202ENST00000375340 AP2S1P53680 142 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 UGT8Q16880 541 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 DPY19L1Q2PZI1 675 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 C11orf91Q3C1V1 193 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 RFTN2Q52LD8 501 aaPredicted RBP6.32□□□□□ -1.4
SMC1A-202ENST00000375340 DOK4Q8TEW6 326 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 NCKAP1Q9Y2A7 1128 aa6.32□□□□□ -1.4
SMC1A-202ENST00000375340 UBE2QL1A1L167 161 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 GABBR2O75899 941 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 MATN4O95460 622 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 IL3P08700 152 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 OR12D1P0DN82 309 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 ANXA8P13928 327 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF10P21506 573 aaPredicted RBP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 PTX3P26022 381 aaPredicted RBP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 ARRB2P32121 409 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 BMXP51813 675 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 DCDC1P59894 354 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 CLLU1OSQ5K130 101 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 AGTRAPQ6RW13 159 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 RETREG3Q86VR2 466 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SLC37A3Q8NCC5 494 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 FAM83FQ8NEG4 500 aaPredicted RBP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 TRUB1Q8WWH5 349 aaKnown RBP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 MAGIXQ9H6Y5 334 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 PRDM8Q9NQV8 689 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 CFL2Q9Y281 166 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 GPR45Q9Y5Y3 372 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 A0A1W2PQ45 241 aaPredicted RBP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 A0A1W2PQY0 241 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 FAM86C2PA6NEL3 165 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 E7EQ34 232 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 DYRK3O43781 588 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 INHAP05111 366 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 CD1EP15812 388 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 ATF4P18848 351 aaPredicted RBP6.31□□□□□ -1.4
SMC1A-202ENST00000375340 ACVR2AP27037 513 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 ABHD18Q0P651 414 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 GPR68Q15743 365 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 FBXO43Q4G163 708 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 KLHL22Q53GT1 634 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 KCTD11Q693B1 232 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 ZNF613Q6PF04 617 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SLC22A15Q8IZD6 547 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 PGBD5Q8N414 524 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 RFKQ969G6 155 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 SLC38A4Q969I6 547 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 HTATIP2Q9BUP3 242 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 DSN1Q9H410 356 aa6.31□□□□□ -1.4
SMC1A-202ENST00000375340 FAM120CQ9NX05 1096 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms