RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 CUEDC1Q9NWM3 386 aaPredicted RBP17.56■□□□□ 0.4
RXRB-202ENST00000374685 VNN3Q9NY84 501 aa17.56■□□□□ 0.4
RXRB-202ENST00000374685 DNAJB9Q9UBS3 223 aa17.56■□□□□ 0.4
RXRB-202ENST00000374685 FZD4Q9ULV1 537 aa17.56■□□□□ 0.4
RXRB-202ENST00000374685 PLEKHM1Q9Y4G2 1056 aa17.56■□□□□ 0.4
RXRB-202ENST00000374685 SCN2BO60939 215 aa17.56■□□□□ 0.4
RXRB-202ENST00000374685 ALPLP05186 524 aa17.56■□□□□ 0.4
RXRB-202ENST00000374685 PRPH2P23942 346 aa17.56■□□□□ 0.4
RXRB-202ENST00000374685 TIA1P31483 386 aaKnown RBP eCLIP17.56■□□□□ 0.4
RXRB-202ENST00000374685 SHMT2P34897 504 aa17.56■□□□□ 0.4
RXRB-202ENST00000374685 SOAT1P35610 550 aa17.56■□□□□ 0.4
RXRB-202ENST00000374685 PIGAP37287 484 aa17.56■□□□□ 0.4
RXRB-202ENST00000374685 ALDH3A2P51648 485 aa17.56■□□□□ 0.4
RXRB-202ENST00000374685 C2orf80Q0P641 193 aa17.56■□□□□ 0.4
RXRB-202ENST00000374685 CAMK2BQ13554 666 aa17.56■□□□□ 0.4
RXRB-202ENST00000374685 HIST2H2ACQ16777 129 aaPredicted RBP17.56■□□□□ 0.4
RXRB-202ENST00000374685 HIST2H2AA3Q6FI13 130 aa17.56■□□□□ 0.4
RXRB-202ENST00000374685 REXO5Q96IC2 774 aaKnown RBP17.56■□□□□ 0.4
RXRB-202ENST00000374685 IMP3Q9NV31 184 aaKnown RBP17.56■□□□□ 0.4
RXRB-202ENST00000374685 C5AR2Q9P296 337 aa17.56■□□□□ 0.4
RXRB-202ENST00000374685 AASSQ9UDR5 926 aa17.56■□□□□ 0.4
RXRB-202ENST00000374685 MITFO75030 526 aaPredicted RBP17.55■□□□□ 0.4
RXRB-202ENST00000374685 SULT1C4O75897 302 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 BMP10O95393 424 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 TNFRSF1BP20333 461 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 HPCAL1P37235 193 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 ALDH9A1P49189 494 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 GZMMP51124 257 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 KIAA1211LQ6NV74 962 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 CALHM3Q86XJ0 350 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 OR14C36Q8NHC7 312 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 SGCDQ92629 289 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 ISOC1Q96CN7 298 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 PYURFQ96I23 114 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 GDE1Q9NZC3 331 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 THAP10Q9P2Z0 257 aaPredicted RBP17.55■□□□□ 0.4
RXRB-202ENST00000374685 PRAMEF33A0A0G2JMD5 474 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 H7BY64 318 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 KCNK5O95279 499 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 C6orf47O95873 294 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 DNAJC5GQ8N7S2 189 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 JPH3Q8WXH2 748 aaPredicted RBP17.55■□□□□ 0.4
RXRB-202ENST00000374685 EFHD2Q96C19 240 aaPredicted RBP17.55■□□□□ 0.4
RXRB-202ENST00000374685 PRAP1Q96NZ9 151 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 DMRT3Q9NQL9 472 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 SNX8Q9Y5X2 465 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 SPEGQ15772 3267 aa17.55■□□□□ 0.4
RXRB-202ENST00000374685 GSSP48637 474 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 VMACQ2NL98 169 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 ZNF658BQ4V348 819 aaPredicted RBP17.54■□□□□ 0.4
RXRB-202ENST00000374685 NXPE4Q6UWF7 544 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 LRRTM4Q86VH4 590 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 EID3Q8N140 333 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 VPS37AQ8NEZ2 397 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 CHTF18Q8WVB6 975 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 OR52A5Q9H2C5 316 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 SLC31A1O15431 190 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 APODP05090 189 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 EIF2S1P05198 315 aaKnown RBP17.54■□□□□ 0.4
RXRB-202ENST00000374685 ACPPP15309 386 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 IDSP22304 550 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 ACADLP28330 430 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 PIGFQ07326 219 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 MTAPQ13126 283 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 SPIN4Q56A73 249 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 PAGE2BQ5JRK9 111 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 COX20Q5RI15 118 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 AGBL4Q5VU57 503 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 FAM46CQ5VWP2 391 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 SYCE2Q6PIF2 218 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 NAGSQ8N159 534 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 TBC1D15Q8TC07 691 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 RAD51AP1Q96B01 352 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 C12orf43Q96C57 262 aaKnown RBP17.54■□□□□ 0.4
RXRB-202ENST00000374685 MACROD1Q9BQ69 325 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 SLC28A3Q9HAS3 691 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 EBF1Q9UH73 591 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 EXO1Q9UQ84 846 aaKnown RBP17.54■□□□□ 0.4
RXRB-202ENST00000374685 MAP4K5Q9Y4K4 846 aa17.54■□□□□ 0.4
RXRB-202ENST00000374685 ETFAP13804 333 aa17.53■□□□□ 0.4
RXRB-202ENST00000374685 HBA1P69905 142 aa17.53■□□□□ 0.4
RXRB-202ENST00000374685 DPTQ07507 201 aa17.53■□□□□ 0.4
RXRB-202ENST00000374685 TMEM52BQ4KMG9 183 aa17.53■□□□□ 0.4
RXRB-202ENST00000374685 TMEM31Q5JXX7 168 aa17.53■□□□□ 0.4
RXRB-202ENST00000374685 TMIGD1Q6UXZ0 262 aa17.53■□□□□ 0.4
RXRB-202ENST00000374685 ZZZ3Q8IYH5 903 aa17.53■□□□□ 0.4
RXRB-202ENST00000374685 ZNF514Q96K75 400 aaPredicted RBP17.53■□□□□ 0.4
RXRB-202ENST00000374685 MAGEB10Q96LZ2 347 aaPredicted RBP17.53■□□□□ 0.4
RXRB-202ENST00000374685 MKRN2Q9H000 416 aaKnown RBP17.53■□□□□ 0.4
RXRB-202ENST00000374685 WDR26Q9H7D7 661 aa17.53■□□□□ 0.4
RXRB-202ENST00000374685 FAM120CQ9NX05 1096 aaKnown RBP17.53■□□□□ 0.4
RXRB-202ENST00000374685 BAG5Q9UL15 447 aa17.53■□□□□ 0.4
RXRB-202ENST00000374685 OR52A4PA6NMU1 304 aa17.53■□□□□ 0.4
RXRB-202ENST00000374685 DCTP40126 519 aa17.53■□□□□ 0.4
RXRB-202ENST00000374685 PTOV1Q86YD1 416 aa17.53■□□□□ 0.4
RXRB-202ENST00000374685 CLVS1Q8IUQ0 354 aaPredicted RBP17.53■□□□□ 0.4
RXRB-202ENST00000374685 SLC44A2Q8IWA5 706 aaPredicted RBP17.53■□□□□ 0.4
RXRB-202ENST00000374685 ADHFE1Q8IWW8 467 aa17.53■□□□□ 0.4
RXRB-202ENST00000374685 OR8J2Q8NGG1 315 aa17.53■□□□□ 0.4
RXRB-202ENST00000374685 EFCAB11Q9BUY7 163 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms