RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 H0YIG0 161 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 FOXE1O00358 373 aaPredicted RBP14.26□□□□□ -0.13
HSPG2-201ENST00000374673 TERTO14746 1132 aaKnown RBP14.26□□□□□ -0.13
HSPG2-201ENST00000374673 FFAR3O14843 346 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 GPR42O15529 346 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 SERPINE1P05121 402 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 PIM1P11309 404 aaPredicted RBP14.26□□□□□ -0.13
HSPG2-201ENST00000374673 ALOX12P18054 663 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 IL1RNP18510 177 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 HMOX2P30519 316 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 HNRNPH1P31943 449 aaKnown RBP14.26□□□□□ -0.13
HSPG2-201ENST00000374673 IFT88Q13099 833 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 DDX39BQ13838 428 aaKnown RBP14.26□□□□□ -0.13
HSPG2-201ENST00000374673 COL9A2Q14055 689 aaPredicted RBP14.26□□□□□ -0.13
HSPG2-201ENST00000374673 CHI3L2Q15782 390 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 TTC19Q6DKK2 380 aaPredicted RBP14.26□□□□□ -0.13
HSPG2-201ENST00000374673 LCN10Q6JVE6 187 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 FAM198BQ6UWH4 519 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 CUZD1Q86UP6 607 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 HOMEZQ8IX15 550 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 DTWD1Q8N5C7 304 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 IL22RA1Q8N6P7 574 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 PPP1R14CQ8TAE6 165 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 MGARPQ8TDB4 240 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 MTERF1Q99551 399 aaKnown RBP14.26□□□□□ -0.13
HSPG2-201ENST00000374673 PAIP2Q9BPZ3 127 aaKnown RBP14.26□□□□□ -0.13
HSPG2-201ENST00000374673 C17orf62Q9BQA9 187 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 FAM117AQ9C073 453 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 REXO4Q9GZR2 422 aaKnown RBP14.26□□□□□ -0.13
HSPG2-201ENST00000374673 CHST8Q9H2A9 424 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 KLHL31Q9H511 634 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 ELOVL6Q9H5J4 265 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 EML4Q9HC35 981 aaKnown RBP14.26□□□□□ -0.13
HSPG2-201ENST00000374673 ANKHQ9HCJ1 492 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 ZNF304Q9HCX3 659 aa14.26□□□□□ -0.13
HSPG2-201ENST00000374673 SEC16AO15027 2179 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 A0A0A6YYC8 382 aaPredicted RBP14.25□□□□□ -0.13
HSPG2-201ENST00000374673 LOC101059948A0A1B0GTJ6 334 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 MAGEB17A8MXT2 336 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 TMEM114B3SHH9 223 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 C21orf140B9A014 251 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 C4orf51C9J302 202 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 I3L1I5 382 aaPredicted RBP14.25□□□□□ -0.13
HSPG2-201ENST00000374673 TAF4O00268 1085 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 GALR3O60755 368 aaPredicted RBP14.25□□□□□ -0.13
HSPG2-201ENST00000374673 TGFB1P01137 390 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 KRT6AP02538 564 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 KRT6BP04259 564 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 CHRNGP07510 517 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 RAB40ALP0C0E4 278 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 ZNF888P0CJ79 500 aaPredicted RBP14.25□□□□□ -0.13
HSPG2-201ENST00000374673 BGNP21810 368 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 GRK2P25098 689 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 ARRB2P32121 409 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 AVPR1BP47901 424 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 KRT6CP48668 564 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 NEK2P51955 445 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 ARFIP1P53367 373 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 FOXA1P55317 472 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 RPS13P62277 151 aaKnown RBP14.25□□□□□ -0.13
HSPG2-201ENST00000374673 PPP2R2AP63151 447 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 SKP1P63208 163 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 ZNF33BQ06732 778 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 NKAIN1Q4KMZ8 207 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 TMEM35AQ53FP2 167 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 ARL13AQ5H913 290 aaPredicted RBP14.25□□□□□ -0.13
HSPG2-201ENST00000374673 DEPDC1Q5TB30 811 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 KHDRBS2Q5VWX1 349 aaKnown RBP14.25□□□□□ -0.13
HSPG2-201ENST00000374673 TRIM40Q6P9F5 258 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 FAM199XQ6PEV8 388 aaPredicted RBP14.25□□□□□ -0.13
HSPG2-201ENST00000374673 CHSY3Q70JA7 882 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 COX15Q7KZN9 410 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 PRSS41Q7RTY9 318 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 PDSS2Q86YH6 399 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 RNF175Q8N4F7 328 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 METTL27Q8N6F8 245 aaPredicted RBP14.25□□□□□ -0.13
HSPG2-201ENST00000374673 SRFBP1Q8NEF9 429 aaKnown RBP14.25□□□□□ -0.13
HSPG2-201ENST00000374673 OR2L5Q8NG80 312 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 OR9A4Q8NGU2 314 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 METTL6Q8TCB7 284 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 CT55Q8WUE5 264 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 SELENOMQ8WWX9 145 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 FKBP10Q96AY3 582 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 MMABQ96EY8 250 aaPredicted RBP14.25□□□□□ -0.13
HSPG2-201ENST00000374673 NAF1Q96HR8 494 aaKnown RBP14.25□□□□□ -0.13
HSPG2-201ENST00000374673 KCNA7Q96RP8 456 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 BRF2Q9HAW0 419 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 TNFRSF12AQ9NP84 129 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 SLC22A11Q9NSA0 550 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 CROTQ9UKG9 612 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 SSUH2Q9Y2M2 353 aa14.25□□□□□ -0.13
HSPG2-201ENST00000374673 SERTM1A2A2V5 107 aa14.24□□□□□ -0.13
HSPG2-201ENST00000374673 C9J4A7 227 aa14.24□□□□□ -0.13
HSPG2-201ENST00000374673 MANBAO00462 879 aa14.24□□□□□ -0.13
HSPG2-201ENST00000374673 RRP8O43159 456 aaKnown RBP14.24□□□□□ -0.13
HSPG2-201ENST00000374673 ERI3O43414 337 aaKnown RBP14.24□□□□□ -0.13
HSPG2-201ENST00000374673 KLHL18O94889 574 aa14.24□□□□□ -0.13
HSPG2-201ENST00000374673 SNUPNO95149 360 aaKnown RBP14.24□□□□□ -0.13
HSPG2-201ENST00000374673 PDYNP01213 254 aa14.24□□□□□ -0.13
HSPG2-201ENST00000374673 ALBP02768 609 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms