RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 RBCK1Q9BYM8 510 aa10.39□□□□□ -0.75
CXCL12-203ENST00000374429 KCNK12Q9HB15 430 aa10.39□□□□□ -0.75
CXCL12-203ENST00000374429 THG1LQ9NWX6 298 aaKnown RBP10.39□□□□□ -0.75
CXCL12-203ENST00000374429 LOC100506127A0A0U1RQW1 187 aa10.39□□□□□ -0.75
CXCL12-203ENST00000374429 NARSO43776 548 aaKnown RBP10.39□□□□□ -0.75
CXCL12-203ENST00000374429 NFATC1O95644 943 aa10.39□□□□□ -0.75
CXCL12-203ENST00000374429 HSD17B1P14061 328 aa10.39□□□□□ -0.75
CXCL12-203ENST00000374429 NR1H2P55055 460 aa10.39□□□□□ -0.75
CXCL12-203ENST00000374429 HBA1P69905 142 aa10.39□□□□□ -0.75
CXCL12-203ENST00000374429 VLDLRP98155 873 aa10.39□□□□□ -0.75
CXCL12-203ENST00000374429 SPIBQ01892 262 aa10.39□□□□□ -0.75
CXCL12-203ENST00000374429 DLX2Q07687 328 aaPredicted RBP10.39□□□□□ -0.75
CXCL12-203ENST00000374429 C8orf59Q8N0T1 100 aaPredicted RBP10.39□□□□□ -0.75
CXCL12-203ENST00000374429 ANKK1Q8NFD2 765 aa10.39□□□□□ -0.75
CXCL12-203ENST00000374429 CCL4L1Q8NHW4 92 aa10.39□□□□□ -0.75
CXCL12-203ENST00000374429 SUN5Q8TC36 379 aa10.39□□□□□ -0.75
CXCL12-203ENST00000374429 RLN3Q8WXF3 142 aa10.39□□□□□ -0.75
CXCL12-203ENST00000374429 SLC35A5Q9BS91 424 aa10.39□□□□□ -0.75
CXCL12-203ENST00000374429 MKRN2Q9H000 416 aaKnown RBP10.39□□□□□ -0.75
CXCL12-203ENST00000374429 MTIF3Q9H2K0 278 aaKnown RBP10.39□□□□□ -0.75
CXCL12-203ENST00000374429 PCDHB3Q9Y5E6 796 aa10.39□□□□□ -0.75
CXCL12-203ENST00000374429 PCDHGA8Q9Y5G5 932 aa10.39□□□□□ -0.75
CXCL12-203ENST00000374429 PTPRZ1P23471 2315 aaPredicted RBP10.39□□□□□ -0.75
CXCL12-203ENST00000374429 CCDC85CA6NKD9 419 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 FRS3O43559 492 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 RASGRP1O95267 797 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 GPIP06744 558 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 PRKACBP22694 351 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 IGFBP5P24593 272 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 GJA4P35212 333 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 HSPA13P48723 471 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 HOXC5Q00444 222 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 LCN8Q6JVE9 175 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 ERN2Q76MJ5 926 aaKnown RBP10.38□□□□□ -0.75
CXCL12-203ENST00000374429 GALNT7Q86SF2 657 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 PIK3C3Q8NEB9 887 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 HMGB4Q8WW32 186 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 SMARCD2Q92925 531 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 IL4I1Q96RQ9 567 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 QRSL1Q9H0R6 528 aaKnown RBP10.38□□□□□ -0.75
CXCL12-203ENST00000374429 WBP1LQ9NX94 342 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 VNN3Q9NY84 501 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 IL20RAQ9UHF4 553 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 EP300Q09472 2414 aaPredicted RBP10.38□□□□□ -0.75
CXCL12-203ENST00000374429 GSAPA4D1B5 854 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 H3BN98 237 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 VILLO15195 856 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 ASGR2P07307 311 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 GSTM1P09488 218 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 CAPGP40121 348 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 MAPK12P53778 367 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 EEFSECP57772 596 aaKnown RBP10.38□□□□□ -0.75
CXCL12-203ENST00000374429 RPL26P61254 145 aaKnown RBP10.38□□□□□ -0.75
CXCL12-203ENST00000374429 GAB1Q13480 694 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 ANKDD1AQ495B1 522 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 FAM209AQ5JX71 171 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 MPP7Q5T2T1 576 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 PPP4R4Q6NUP7 873 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 ENPP7Q6UWV6 458 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 TMIGD1Q6UXZ0 262 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 C17orf64Q86WR6 236 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 TERB1Q8NA31 727 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 ZNF540Q8NDQ6 660 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 OR5D16Q8NGK9 328 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 PATE1Q8WXA2 126 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 STARD8Q92502 1023 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 TFAP2CQ92754 450 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 GLMNQ92990 594 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 ZNF707Q96C28 371 aaPredicted RBP10.38□□□□□ -0.75
CXCL12-203ENST00000374429 BRINP2Q9C0B6 783 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 TBC1D23Q9NUY8 699 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 GMPPBQ9Y5P6 360 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 TRMUO75648 421 aaKnown RBP10.38□□□□□ -0.75
CXCL12-203ENST00000374429 MSL3P1P0C860 447 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 RRM2P31350 389 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 SLC5A2P31639 672 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 TGFBR1P36897 503 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 MMP12P39900 470 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 SSR2P43308 183 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 DAG1Q14118 895 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 PDGFRLQ15198 375 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 C9orf64Q5T6V5 341 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 HENMT1Q5T8I9 393 aaKnown RBP10.38□□□□□ -0.75
CXCL12-203ENST00000374429 PRR23CQ6ZRP0 262 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 PIWIL3Q7Z3Z3 882 aaKnown RBP10.38□□□□□ -0.75
CXCL12-203ENST00000374429 AMER3Q8N944 861 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 ZNF597Q96LX8 424 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 MRPS26Q9BYN8 205 aaKnown RBP10.38□□□□□ -0.75
CXCL12-203ENST00000374429 REEP1Q9H902 201 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 MARCH7Q9H992 704 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 RSL24D1Q9UHA3 163 aaKnown RBP10.38□□□□□ -0.75
CXCL12-203ENST00000374429 RIMKLBQ9ULI2 386 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 CLCA2Q9UQC9 943 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 PCDHGA11Q9Y5H2 935 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 TTC28Q96AY4 2481 aa10.38□□□□□ -0.75
CXCL12-203ENST00000374429 HYAL3O43820 417 aaPredicted RBP10.37□□□□□ -0.75
CXCL12-203ENST00000374429 JUPP14923 745 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 GGT1P19440 569 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 HYAL2Q12891 473 aa10.37□□□□□ -0.75
CXCL12-203ENST00000374429 RAPSNQ13702 412 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms