RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 OR2AP1Q8NGE2 309 aa13.77□□□□□ -0.21
LMX1B-202ENST00000373474 CD99L2Q8TCZ2 262 aa13.77□□□□□ -0.21
LMX1B-202ENST00000373474 SGCDQ92629 289 aa13.77□□□□□ -0.21
LMX1B-202ENST00000373474 C5P01031 1676 aa13.77□□□□□ -0.21
LMX1B-202ENST00000373474 CENPBD1B2RD01 187 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 HPRP00739 348 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 S100A10P60903 97 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 AQP11Q8NBQ7 271 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 NKD1Q969G9 470 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 ZNF382Q96SR6 550 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 ADAMTS10Q9H324 1103 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 RGCCQ9H4X1 137 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 LIN28AQ9H9Z2 209 aaKnown RBP13.76□□□□□ -0.21
LMX1B-202ENST00000373474 GIMAP2Q9UG22 337 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 C14orf166Q9Y224 244 aaKnown RBP13.76□□□□□ -0.21
LMX1B-202ENST00000373474 NOP16Q9Y3C1 178 aaKnown RBP13.76□□□□□ -0.21
LMX1B-202ENST00000373474 C12orf71A8MTZ7 269 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 AGR2O95994 175 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 RENP00797 406 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 C7P10643 843 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 ZNF30P17039 623 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 ARSFP54793 590 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 ZNF792Q3KQV3 632 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 FAAH2Q6GMR7 532 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 CDHR3Q6ZTQ4 885 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 RBM18Q96H35 190 aaKnown RBP13.76□□□□□ -0.21
LMX1B-202ENST00000373474 FBRSL1Q9HCM7 1045 aaKnown RBP13.76□□□□□ -0.21
LMX1B-202ENST00000373474 ZDHHC4Q9NPG8 344 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 RNF6Q9Y252 685 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 GDF5P43026 501 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 KCNC3Q14003 757 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 VITQ6UXI7 678 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 PMM1Q92871 262 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 IL4I1Q96RQ9 567 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 ELK4P28324 431 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 SLC10A2Q12908 348 aaPredicted RBP13.76□□□□□ -0.21
LMX1B-202ENST00000373474 CTU1Q7Z7A3 348 aaKnown RBP13.76□□□□□ -0.21
LMX1B-202ENST00000373474 GALNT7Q86SF2 657 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 COQ8AQ8NI60 647 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 KCNJ9Q92806 393 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 TMEM80Q96HE8 168 aa13.76□□□□□ -0.21
LMX1B-202ENST00000373474 CCM2LQ9NUG4 571 aaPredicted RBP13.76□□□□□ -0.21
LMX1B-202ENST00000373474 ZNF3P17036 446 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 MSR1P21757 451 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 PRKACGP22612 351 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 ZNF630Q2M218 657 aaPredicted RBP13.75□□□□□ -0.21
LMX1B-202ENST00000373474 NANOGP8Q6NSW7 305 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 ASRGL1Q7L266 308 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 NPAS3Q8IXF0 933 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 PNLDC1Q8NA58 520 aaKnown RBP13.75□□□□□ -0.21
LMX1B-202ENST00000373474 DBF4BQ8NFT6 615 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 THRSPQ92748 146 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 FIZ1Q96SL8 496 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 PKP4Q99569 1192 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 TBX5Q99593 518 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 TAPBPLQ9BX59 468 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 NANOGQ9H9S0 305 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 MKKSQ9NPJ1 570 aaPredicted RBP13.75□□□□□ -0.21
LMX1B-202ENST00000373474 CTPS2Q9NRF8 586 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 ZCCHC3Q9NUD5 404 aaKnown RBP13.75□□□□□ -0.21
LMX1B-202ENST00000373474 RPH3AQ9Y2J0 694 aaPredicted RBP13.75□□□□□ -0.21
LMX1B-202ENST00000373474 FAM72CH0Y354 149 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 SNNO75324 88 aaPredicted RBP13.75□□□□□ -0.21
LMX1B-202ENST00000373474 CNTN5O94779 1100 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 OAS1P00973 400 aaKnown RBP13.75□□□□□ -0.21
LMX1B-202ENST00000373474 CSNK2A2P19784 350 aaPredicted RBP13.75□□□□□ -0.21
LMX1B-202ENST00000373474 GRIA2P42262 883 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 AGTR2P50052 363 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 SEC13P55735 322 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 VLDLRP98155 873 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 ILF3Q12906 894 aaKnown RBP eCLIP13.75□□□□□ -0.21
LMX1B-202ENST00000373474 FADDQ13158 208 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 ARFRP1Q13795 201 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 RAB39AQ14964 217 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 SEC23BQ15437 767 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 ANKDD1AQ495B1 522 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 FAM72AQ5TYM5 149 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 FAM72DQ6L9T8 149 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 FAM72BQ86X60 149 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 CHERPQ8IWX8 916 aaKnown RBP13.75□□□□□ -0.21
LMX1B-202ENST00000373474 GPR151Q8TDV0 419 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 TPT1P8Q9HAU6 139 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 TRIM36Q9NQ86 728 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 BORCS7-ASMTA0A0B4J1R7 106 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 INMT-MINDY4F8WBC2 141 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 NARSO43776 548 aaKnown RBP13.75□□□□□ -0.21
LMX1B-202ENST00000373474 RAB36O95755 333 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 ZNF20P17024 532 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 HACD2Q6Y1H2 254 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 SYNPOQ8N3V7 929 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 METTL25Q8N6Q8 603 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 RIT1Q92963 219 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 SLC7A6OSQ96CW6 309 aaPredicted RBP13.75□□□□□ -0.21
LMX1B-202ENST00000373474 MRGPRX2Q96LB1 330 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 PCDHGB5Q9Y5G0 923 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 EPOP01588 193 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 HAPLN1P10915 354 aaPredicted RBP13.75□□□□□ -0.21
LMX1B-202ENST00000373474 ANXA3P12429 323 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 HTR1EP28566 365 aa13.75□□□□□ -0.21
LMX1B-202ENST00000373474 IL12BP29460 328 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms