RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 TOR3AQ9H497 397 aa12.84□□□□□ -0.35
CSTF2-201ENST00000372972 FBXL12Q9NXK8 326 aa12.84□□□□□ -0.35
CSTF2-201ENST00000372972 SPATA7Q9P0W8 599 aa12.84□□□□□ -0.35
CSTF2-201ENST00000372972 THEGQ9P2T0 379 aa12.84□□□□□ -0.35
CSTF2-201ENST00000372972 SPASTQ9UBP0 616 aa12.84□□□□□ -0.35
CSTF2-201ENST00000372972 CKAP5Q14008 2032 aa12.84□□□□□ -0.35
CSTF2-201ENST00000372972 PCM1Q15154 2024 aa12.84□□□□□ -0.35
CSTF2-201ENST00000372972 ANKDD1BA6NHY2 528 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 GPR37L1O60883 481 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 FUCA1P04066 466 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 NTRK1P04629 796 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 ETS2P15036 469 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 CTHP32929 405 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 C16orf72Q14CZ0 275 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 CCNYL2Q5T2Q4 361 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 CBLL1Q75N03 491 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 TMEM179BQ7Z7N9 219 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 SLC9B2Q86UD5 537 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 HS3ST5Q8IZT8 346 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 ABHD11Q8NFV4 315 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 OR4K1Q8NGD4 311 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 ADAMTS16Q8TE57 1224 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 NMD3Q96D46 503 aaKnown RBP12.83□□□□□ -0.35
CSTF2-201ENST00000372972 MKRN2Q9H000 416 aaKnown RBP12.83□□□□□ -0.35
CSTF2-201ENST00000372972 WASH6PQ9NQA3 447 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 FAM118AQ9NWS6 357 aa12.83□□□□□ -0.35
CSTF2-201ENST00000372972 IFT80Q9P2H3 777 aaPredicted RBP12.83□□□□□ -0.35
CSTF2-201ENST00000372972 ATG2BQ96BY7 2078 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 TRPM6Q9BX84 2022 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 C2CD4DB7Z1M9 353 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 H3BSA7 217 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 PLRG1O43660 514 aaKnown RBP12.83□□□□□ -0.36
CSTF2-201ENST00000372972 NOBOXO60393 691 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 ACP5P13686 325 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 NTSR1P30989 418 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 CCR8P51685 355 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 HBA1P69905 142 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 PPP1R8Q12972 351 aaKnown RBP12.83□□□□□ -0.36
CSTF2-201ENST00000372972 GAB1Q13480 694 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 SDE2Q6IQ49 451 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 KIAA1161Q6NSJ0 714 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 KIAA1211LQ6NV74 962 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 IKBIPQ70UQ0 350 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 LPCAT2Q7L5N7 544 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 NAGSQ8N159 534 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 RAB42Q8N4Z0 105 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 ZNF555Q8NEP9 628 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 OR14C36Q8NHC7 312 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 ZFAND2BQ8WV99 257 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 FERD3LQ96RJ6 166 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 NRTNQ99748 197 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 SLC17A9Q9BYT1 436 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 TRIM4Q9C037 500 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 RMI1Q9H9A7 625 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 BAG5Q9UL15 447 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 AP1M2Q9Y6Q5 423 aa12.83□□□□□ -0.36
CSTF2-201ENST00000372972 A0A1W2PQU0 124 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 PRR23AA6NEV1 266 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 SEMA3DO95025 777 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 C6orf47O95873 294 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 EGFP01133 1207 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 DNTTP04053 509 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 SEMG1P04279 462 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 FABP3P05413 133 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 NUDT7P0C024 238 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 PRKACGP22612 351 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 SH3BGRP55822 239 aaPredicted RBP12.82□□□□□ -0.36
CSTF2-201ENST00000372972 LRIT3Q3SXY7 679 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.82□□□□□ -0.36
CSTF2-201ENST00000372972 DEPDC1Q5TB30 811 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 OR2T5Q6IEZ7 315 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 SHQ1Q6PI26 577 aaKnown RBP12.82□□□□□ -0.36
CSTF2-201ENST00000372972 OR2T29Q8NH02 315 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 FAM131CQ96AQ9 280 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 C12orf66Q96MD2 445 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 INSM2Q96T92 566 aaPredicted RBP12.82□□□□□ -0.36
CSTF2-201ENST00000372972 TIMM29Q9BSF4 260 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 C1QTNF7Q9BXJ2 289 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 ASPSCR1Q9BZE9 553 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 PITHD1Q9GZP4 211 aaPredicted RBP12.82□□□□□ -0.36
CSTF2-201ENST00000372972 OSGEPL1Q9H4B0 414 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 NT5DC2Q9H857 520 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 SLC24A3Q9HC58 644 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 TM9SF3Q9HD45 589 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 VCX3AQ9NNX9 186 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 CUEDC1Q9NWM3 386 aaPredicted RBP12.82□□□□□ -0.36
CSTF2-201ENST00000372972 C3orf18Q9UK00 162 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 FAF1Q9UNN5 650 aaPredicted RBP12.82□□□□□ -0.36
CSTF2-201ENST00000372972 WDR37Q9Y2I8 494 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 CEPT1Q9Y6K0 416 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 U3KQV3 271 aa12.82□□□□□ -0.36
CSTF2-201ENST00000372972 A0A1W2PPV9 198 aa12.81□□□□□ -0.36
CSTF2-201ENST00000372972 H7BY64 318 aa12.81□□□□□ -0.36
CSTF2-201ENST00000372972 HS6ST1O60243 411 aa12.81□□□□□ -0.36
CSTF2-201ENST00000372972 KCNJ13O60928 360 aa12.81□□□□□ -0.36
CSTF2-201ENST00000372972 RNGTTO60942 597 aaKnown RBP12.81□□□□□ -0.36
CSTF2-201ENST00000372972 FKBP9O95302 570 aa12.81□□□□□ -0.36
CSTF2-201ENST00000372972 CEACAM5P06731 702 aa12.81□□□□□ -0.36
CSTF2-201ENST00000372972 IL3P08700 152 aa12.81□□□□□ -0.36
CSTF2-201ENST00000372972 TPP2P29144 1249 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms