RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 GALNT10Q86SR1 603 aa17.14■□□□□ 0.33
CTSA-204ENST00000372484 SLC9B2Q86UD5 537 aa17.14■□□□□ 0.33
CTSA-204ENST00000372484 ANKRD53Q8N9V6 530 aa17.14■□□□□ 0.33
CTSA-204ENST00000372484 LINC01555Q8NAE3 123 aa17.14■□□□□ 0.33
CTSA-204ENST00000372484 ABHD11Q8NFV4 315 aa17.14■□□□□ 0.33
CTSA-204ENST00000372484 APOOQ9BUR5 198 aa17.14■□□□□ 0.33
CTSA-204ENST00000372484 RHBGQ9H310 441 aa17.14■□□□□ 0.33
CTSA-204ENST00000372484 EPB41L1Q9H4G0 881 aa17.14■□□□□ 0.33
CTSA-204ENST00000372484 RPS6KA6Q9UK32 745 aa17.14■□□□□ 0.33
CTSA-204ENST00000372484 PLEKHM1Q9Y4G2 1056 aa17.14■□□□□ 0.33
CTSA-204ENST00000372484 FEZF1A0PJY2 475 aa17.13■□□□□ 0.33
CTSA-204ENST00000372484 E2F6O75461 281 aa17.13■□□□□ 0.33
CTSA-204ENST00000372484 OR6B1O95007 311 aa17.13■□□□□ 0.33
CTSA-204ENST00000372484 PEX19P40855 299 aa17.13■□□□□ 0.33
CTSA-204ENST00000372484 ADARB1P78563 741 aaKnown RBP17.13■□□□□ 0.33
CTSA-204ENST00000372484 KRT33BQ14525 404 aa17.13■□□□□ 0.33
CTSA-204ENST00000372484 CNPY1Q3B7I2 92 aa17.13■□□□□ 0.33
CTSA-204ENST00000372484 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.13■□□□□ 0.33
CTSA-204ENST00000372484 SPESP1Q6UW49 350 aa17.13■□□□□ 0.33
CTSA-204ENST00000372484 ANGPTL8Q6UXH0 198 aa17.13■□□□□ 0.33
CTSA-204ENST00000372484 PATL1Q86TB9 770 aaKnown RBP17.13■□□□□ 0.33
CTSA-204ENST00000372484 FAM124AQ86V42 546 aa17.13■□□□□ 0.33
CTSA-204ENST00000372484 ZDHHC21Q8IVQ6 265 aa17.13■□□□□ 0.33
CTSA-204ENST00000372484 SYNPOQ8N3V7 929 aa17.13■□□□□ 0.33
CTSA-204ENST00000372484 TRIML2Q8N7C3 387 aa17.13■□□□□ 0.33
CTSA-204ENST00000372484 CIDECQ96AQ7 238 aaPredicted RBP17.13■□□□□ 0.33
CTSA-204ENST00000372484 SPATA9Q9BWV2 254 aa17.13■□□□□ 0.33
CTSA-204ENST00000372484 H0YAE9 185 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 CACNB4O00305 520 aaPredicted RBP17.12■□□□□ 0.33
CTSA-204ENST00000372484 PLPP1O14494 284 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 C6orf47O95873 294 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 HPRP00739 348 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 IL3P08700 152 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 NUDT7P0C024 238 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 THRBP10828 461 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 PPP1R8Q12972 351 aaKnown RBP17.12■□□□□ 0.33
CTSA-204ENST00000372484 VEZF1Q14119 521 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.12■□□□□ 0.33
CTSA-204ENST00000372484 CCNYL2Q5T2Q4 361 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 DEPDC1Q5TB30 811 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 KHDRBS2Q5VWX1 349 aaKnown RBP17.12■□□□□ 0.33
CTSA-204ENST00000372484 ABRAXAS1Q6UWZ7 409 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 LPCAT2Q7L5N7 544 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 HS3ST5Q8IZT8 346 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 GOT1L1Q8NHS2 421 aaPredicted RBP17.12■□□□□ 0.33
CTSA-204ENST00000372484 MTERF3Q96E29 417 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 SIPA1Q96FS4 1042 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 CAMK1GQ96NX5 476 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 CHST8Q9H2A9 424 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 PREBQ9HCU5 417 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 MIEF1Q9NQG6 463 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 GMEB1Q9Y692 573 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 PLXND1Q9Y4D7 1925 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 ANHXE9PGG2 379 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 TBX6O95947 436 aaPredicted RBP17.12■□□□□ 0.33
CTSA-204ENST00000372484 TPP2P29144 1249 aaPredicted RBP17.12■□□□□ 0.33
CTSA-204ENST00000372484 MAGEA2P43356 314 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 RAB28P51157 221 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 PPP2CBP62714 309 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 PPP2CAP67775 309 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 REEP5Q00765 189 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 MYBPC3Q14896 1274 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 CLCA4Q14CN2 919 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 IKBIPQ70UQ0 350 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 F2RL3Q96RI0 385 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 MS4A8Q9BY19 250 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 XKR8Q9H6D3 395 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 SMURF2Q9HAU4 748 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 U3KQV3 271 aa17.12■□□□□ 0.33
CTSA-204ENST00000372484 MYO10Q9HD67 2058 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 OR52A4PA6NMU1 304 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 PDZK1P1A8MUH7 402 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 GPR37L1O60883 481 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 SEMA3DO95025 777 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 LTBRP36941 435 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 DCTP40126 519 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 MPEG1Q2M385 716 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 KCTD21Q4G0X4 260 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 USP51Q70EK9 711 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 NAGSQ8N159 534 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 OR5K1Q8NHB7 308 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 MAL2Q969L2 176 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 RBM4BQ9BQ04 359 aaKnown RBP17.11■□□□□ 0.33
CTSA-204ENST00000372484 SLC35A5Q9BS91 424 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 RBM4Q9BWF3 364 aaKnown RBP17.11■□□□□ 0.33
CTSA-204ENST00000372484 OSBPL10Q9BXB5 764 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 IL1RAPQ9NPH3 570 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 SCML1Q9UN30 329 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 FAF1Q9UNN5 650 aaPredicted RBP17.11■□□□□ 0.33
CTSA-204ENST00000372484 PIAS3Q9Y6X2 628 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 GOLGA4Q13439 2230 aaKnown RBP17.11■□□□□ 0.33
CTSA-204ENST00000372484 RTCAO00442 366 aaKnown RBP17.11■□□□□ 0.33
CTSA-204ENST00000372484 SCAMP1O15126 338 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 NOBOXO60393 691 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 KCNJ13O60928 360 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 FKBP9O95302 570 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 CRATP43155 626 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 PPP2R2BQ00005 443 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 PLCL1Q15111 1095 aa17.11■□□□□ 0.33
CTSA-204ENST00000372484 ADCK2Q7Z695 626 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms