RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ZNF251Q9BRH9 671 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 REG4Q9BYZ8 158 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 GPR63Q9BZJ6 419 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 TCF7L1Q9HCS4 588 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 ACOT13Q9NPJ3 140 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 XPNPEP3Q9NQH7 507 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 CATSPERZQ9NTU4 200 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 RDH8Q9NYR8 311 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 PADI3Q9ULW8 664 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 EDARQ9UNE0 448 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 PLCL2Q9UPR0 1127 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 TMEM82A0PJX8 343 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 OR2A25A4D2G3 310 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 FIGNL2A6NMB9 653 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 DNASE2O00115 360 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-203ENST00000372232 UPK1AO00322 258 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 SLC30A4O14863 429 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 SIGLEC6O43699 453 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 B3GAT3O94766 335 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 SUPT7LO94864 414 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 APOL3O95236 402 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 POMCP01189 267 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 RPLP2P05387 115 aaKnown RBP8.54□□□□□ -1.04
ATG4A-203ENST00000372232 H2AFB1P0C5Y9 115 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 H2AFB2P0C5Z0 115 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 ODC1P11926 461 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 PTPN3P26045 913 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 CD52P31358 61 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 THPOP40225 353 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 GSTM5P46439 218 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 POU3F4P49335 361 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 CXCR3P49682 368 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 SLC35A2P78381 396 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 IL18R1Q13478 541 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 FASTKQ14296 549 aaKnown RBP8.54□□□□□ -1.04
ATG4A-203ENST00000372232 PITRM1Q5JRX3 1037 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 ZNF691Q5VV52 312 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 MFSD14CQ5VZR4 134 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 BSPRYQ5W0U4 402 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 SUSD1Q6UWL2 747 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 NPWQ8N729 165 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 SLC37A3Q8NCC5 494 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 BPIFB1Q8TDL5 484 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 POF1BQ8WVV4 589 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 SLC5A11Q8WWX8 675 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 C19orf60Q96EN9 201 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 MRPL48Q96GC5 212 aaKnown RBP8.54□□□□□ -1.04
ATG4A-203ENST00000372232 AMBRA1Q9C0C7 1298 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 MS4A7Q9GZW8 240 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-203ENST00000372232 IL22Q9GZX6 179 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 WDCPQ9H6R7 721 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 RGS18Q9NS28 235 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 KLHL8Q9P2G9 620 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-203ENST00000372232 MALT1Q9UDY8 824 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 MTF2Q9Y483 593 aaPredicted RBP8.54□□□□□ -1.04
ATG4A-203ENST00000372232 PCDHGA2Q9Y5H1 932 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 PCDHA9Q9Y5H5 950 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 SCN10AQ9Y5Y9 1956 aa8.54□□□□□ -1.04
ATG4A-203ENST00000372232 A0A0U1RQF3 1178 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 A0A1W2PP18 115 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 TRABD2BA6NFA1 517 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 MFSD2BA6NFX1 497 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 SDHDO14521 159 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 SEPT4O43236 478 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 PDE9AO76083 593 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 LRIG2O94898 1065 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 PGLSO95336 258 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 AGR2O95994 175 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 HK1P19367 917 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 POU1F1P28069 291 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 CA5AP35218 305 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 EPHA5P54756 1037 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 GABREP78334 506 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 CDK5R2Q13319 367 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 EXOSC2Q13868 293 aaKnown RBP8.53□□□□□ -1.04
ATG4A-203ENST00000372232 GRB7Q14451 532 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 GPR19Q15760 415 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 PRSS53Q2L4Q9 553 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 MANEALQ5VSG8 457 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 CD300LGQ6UXG3 332 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 RAB7BQ96AH8 199 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 DPYSL5Q9BPU6 564 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 HOPXQ9BPY8 73 aaPredicted RBP8.53□□□□□ -1.04
ATG4A-203ENST00000372232 TBCDQ9BTW9 1192 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 ARHGAP39Q9C0H5 1083 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 TKTL2Q9H0I9 626 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 ZNF275Q9NSD4 429 aaPredicted RBP8.53□□□□□ -1.04
ATG4A-203ENST00000372232 ABCC13Q9NSE7 274 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 BABAM2Q9NXR7 383 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 SLC17A6Q9P2U8 582 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 OR12D3Q9UGF7 316 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 UBQLN2Q9UHD9 624 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 ZDHHC2Q9UIJ5 367 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 SLC6A14Q9UN76 642 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 TPRKBQ9Y3C4 175 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 TSC2P49815 1807 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 BRCA2P51587 3418 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 ARGFXA6NJG6 315 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 SMLR1H3BR10 107 aa8.53□□□□□ -1.04
ATG4A-203ENST00000372232 WRBO00258 174 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms