RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 KIR2DS3Q14952 304 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 KIR2DS5Q14953 304 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 PRSS53Q2L4Q9 553 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 MUM1Q2TAK8 710 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 IRAK1BP1Q5VVH5 260 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 CALHM3Q86XJ0 350 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 KBTBD2Q8IY47 623 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 NAGSQ8N159 534 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 MFSD9Q8NBP5 474 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 SLC37A2Q8TED4 501 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 AURKBQ96GD4 344 aaPredicted RBP16.75■□□□□ 0.27
SSBP3-203ENST00000371319 GBP5Q96PP8 586 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 OR2A14Q96R47 310 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 PRPF18Q99633 342 aaKnown RBP16.75■□□□□ 0.27
SSBP3-203ENST00000371319 PKP2Q99959 881 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 ECSITQ9BQ95 431 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 THUMPD3Q9BV44 507 aaKnown RBP16.75■□□□□ 0.27
SSBP3-203ENST00000371319 BHLHE41Q9C0J9 482 aaPredicted RBP16.75■□□□□ 0.27
SSBP3-203ENST00000371319 SYNPO2LQ9H987 977 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 APOBEC3BQ9UH17 382 aaKnown RBP16.75■□□□□ 0.27
SSBP3-203ENST00000371319 SNX7Q9UNH6 387 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 LRRC42Q9Y546 428 aa16.75■□□□□ 0.27
SSBP3-203ENST00000371319 OR5K4A6NMS3 321 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 IL3P08700 152 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 EFNA1P20827 205 aaPredicted RBP16.74■□□□□ 0.27
SSBP3-203ENST00000371319 BCKDHBP21953 392 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 GRK3P35626 688 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 SOX11P35716 441 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 AHRP35869 848 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 CXCL12P48061 93 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 BLKP51451 505 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 HYAL2Q12891 473 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 PLCL1Q15111 1095 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 CCNYL2Q5T2Q4 361 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 ANXA8L1Q5VT79 327 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 IKBIPQ70UQ0 350 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 IQCHQ86VS3 1027 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 PROSER1Q86XN7 944 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 GOLM1Q8NBJ4 401 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 OR10A6Q8NH74 314 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 RGMAQ96B86 450 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 SLC22A18Q96BI1 424 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 KAT8Q9H7Z6 458 aaKnown RBP16.74■□□□□ 0.27
SSBP3-203ENST00000371319 COPS7BQ9H9Q2 264 aaPredicted RBP16.74■□□□□ 0.27
SSBP3-203ENST00000371319 SIT1Q9Y3P8 196 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 AP4S1Q9Y587 144 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 AP1M2Q9Y6Q5 423 aa16.74■□□□□ 0.27
SSBP3-203ENST00000371319 LRIT2A6NDA9 550 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 FAM220BPB1ANY3 271 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 AXIN1O15169 862 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 CAPN5O15484 640 aaPredicted RBP16.73■□□□□ 0.27
SSBP3-203ENST00000371319 CPSF4O95639 269 aaKnown RBP16.73■□□□□ 0.27
SSBP3-203ENST00000371319 C1QCP02747 245 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 CSF2P04141 144 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 UGT2B7P16662 529 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 GGT1P19440 569 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 GSTM2P28161 218 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 RPL3P39023 403 aaKnown RBP16.73■□□□□ 0.27
SSBP3-203ENST00000371319 RACK1P63244 317 aaKnown RBP16.73■□□□□ 0.27
SSBP3-203ENST00000371319 LPCAT4Q643R3 524 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 R3HCC1LQ7Z5L2 792 aaKnown RBP16.73■□□□□ 0.27
SSBP3-203ENST00000371319 TRIM73Q86UV7 250 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 MMP21Q8N119 569 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 C10orf111Q8N326 155 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 DTWD1Q8N5C7 304 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 ZNF548Q8NEK5 533 aaPredicted RBP16.73■□□□□ 0.27
SSBP3-203ENST00000371319 C1orf216Q8TAB5 229 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 FAM110BQ8TC76 370 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 TM4SF18Q96CE8 201 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 MTERF3Q96E29 417 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 PHF12Q96QT6 1004 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 PANX1Q96RD7 426 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 KLHL31Q9H511 634 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 TM9SF3Q9HD45 589 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 ACTR10Q9NZ32 417 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 SH3BP4Q9P0V3 963 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 MUTYHQ9UIF7 546 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 MAGEL2Q9UJ55 1249 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 ADAM29Q9UKF5 820 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 PCDHGA4Q9Y5G9 962 aa16.73■□□□□ 0.27
SSBP3-203ENST00000371319 OR6C74A6NCV1 312 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 TLR4O00206 839 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 RNASET2O00584 256 aaKnown RBP16.72■□□□□ 0.27
SSBP3-203ENST00000371319 STATHP02808 62 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 SERPIND1P05546 499 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 POLR2CP19387 275 aaPredicted RBP16.72■□□□□ 0.27
SSBP3-203ENST00000371319 PEX2P28328 305 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 DMWDQ09019 674 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 SLC14A1Q13336 389 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 MPEG1Q2M385 716 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 ADPRMQ3LIE5 342 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 OGFRL1Q5TC84 451 aaPredicted RBP16.72■□□□□ 0.27
SSBP3-203ENST00000371319 GLYATQ6IB77 296 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 SLC36A4Q6YBV0 504 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 PAGE2Q7Z2X7 111 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 GPR155Q7Z3F1 870 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 ADGRG5Q8IZF4 528 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 TBC1D19Q8N5T2 526 aa16.72■□□□□ 0.27
SSBP3-203ENST00000371319 TMEM102Q8N9M5 508 aaPredicted RBP16.72■□□□□ 0.27
SSBP3-203ENST00000371319 OR2T12Q8NG77 320 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms