RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 NUDT4Q9NZJ9 180 aa19.4■□□□□ 0.7
SMNDC1-201ENST00000369592 HCN3Q9P1Z3 774 aa19.4■□□□□ 0.7
SMNDC1-201ENST00000369592 MKL2Q9ULH7 1088 aa19.4■□□□□ 0.7
SMNDC1-201ENST00000369592 A0A087X1B8 175 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 B3GALT4O96024 378 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 HEXBP07686 556 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 CD22P20273 847 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 IL10P22301 178 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 ITGA3P26006 1051 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 CASP2P42575 452 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 XCR1P46094 333 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 IRF9Q00978 393 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 RGS1Q08116 209 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 IGFBP7Q16270 282 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 CRB2Q5IJ48 1285 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 RAPH1Q70E73 1250 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 VN1R5Q7Z5H4 357 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 TBC1D1Q86TI0 1168 aaPredicted RBP19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 PARP9Q8IXQ6 854 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 OR5T3Q8NGG3 340 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 KCTD4Q8WVF5 259 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 SEC16BQ96JE7 1060 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 OR1F2PQ96R84 312 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 CD244Q9BZW8 370 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 ZNF160Q9HCG1 818 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 WWOXQ9NZC7 414 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 CD274Q9NZQ7 290 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 ZNF490Q9ULM2 529 aaPredicted RBP19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 RNF112Q9ULX5 631 aa19.39■□□□□ 0.69
SMNDC1-201ENST00000369592 KLK8O60259 260 aa19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 ACSL3O95573 720 aa19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 ALPPP05187 535 aa19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 ZNF888P0CJ79 500 aaPredicted RBP19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 CXCR2P25025 360 aa19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 GSTM2P28161 218 aa19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 MLLT10P55197 1068 aa19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 RHAGQ02094 409 aa19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 SLBPQ14493 270 aaKnown RBP eCLIP19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 TBCCQ15814 346 aa19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 ADPRMQ3LIE5 342 aa19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 PLEKHN1Q494U1 663 aaPredicted RBP19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 NIPAL1Q6NVV3 410 aa19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 TMIGD1Q6UXZ0 262 aa19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 Q6ZS92 163 aa19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 AMER2Q8N7J2 671 aa19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 PLPP5Q8NEB5 264 aa19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 WDR77Q9BQA1 342 aaPredicted RBP19.38■□□□□ 0.69
SMNDC1-201ENST00000369592 NSG1A0A0A6YYJ2 146 aa19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 OR2W5A6NFC9 320 aa19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 ZNF860A6NHJ4 632 aa19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 WFS1O76024 890 aa19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 KLHL2O95198 593 aa19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 SERPINA7P05543 415 aa19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 PRR35P0CG20 571 aa19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 SOX11P35716 441 aa19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 RBBP5Q15291 538 aaKnown RBP19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 DEFB134Q4QY38 66 aa19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 FAAH2Q6GMR7 532 aa19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 LRRC70Q7Z2Q7 622 aa19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 TTLQ8NG68 377 aa19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 MRRFQ96E11 262 aaKnown RBP19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 THOC3Q96J01 351 aaKnown RBP19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 TXLNGYQ9BZA5 131 aa19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 RHBGQ9H310 441 aa19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 RIC8BQ9NVN3 520 aa19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 PLAAQ9Y263 795 aa19.37■□□□□ 0.69
SMNDC1-201ENST00000369592 USP9XQ93008 2570 aaPredicted RBP19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 A0A096LPK6 155 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 LRIT2A6NDA9 550 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 UBXN8O00124 270 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 CHST10O43529 356 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 H2AFYO75367 372 aaKnown RBP19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 CLEC3AO75596 197 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 C8orf89P0DMQ9 161 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 AGTR2P50052 363 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 EEF1A2Q05639 463 aaKnown RBP19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 DOC2AQ14183 400 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 ACAP2Q15057 778 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 PDK4Q16654 411 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 FAM83EQ2M2I3 478 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 AGAP7PQ5VUJ5 663 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 RIPOR1Q6ZS17 1223 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 LANCL3Q6ZV70 420 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 ABHD13Q7L211 337 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 KBTBD2Q8IY47 623 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 PLD6Q8N2A8 252 aaKnown RBP19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 LRRN4CLQ8ND94 238 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 DCAKDQ8WVC6 231 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 TRIM44Q96DX7 344 aaPredicted RBP19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 PTCD3Q96EY7 689 aaKnown RBP19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 AGAP4Q96P64 663 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 LMF1Q96S06 567 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 PAFAH2Q99487 392 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 MFRPQ9BY79 579 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 ZNF180Q9UJW8 692 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 NFU1Q9UMS0 254 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 B3GNT3Q9Y2A9 372 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 LRRK2Q5S007 2527 aa19.36■□□□□ 0.69
SMNDC1-201ENST00000369592 CLEC18AA5D8T8 446 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms