RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 KLHL21Q9UJP4 597 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 TMEM5Q9Y2B1 443 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 MED16Q9Y2X0 877 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 SNX11Q9Y5W9 270 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 ANK2Q01484 3957 aa6.62□□□□□ -1.35
CSDE1-204ENST00000369530 F5H5T6 163 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 SEC14L5O43304 696 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 MRPS14O60783 128 aaKnown RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 PGLSO95336 258 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 GNAO1P09471 354 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 IRF1P10914 325 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 FGF3P11487 239 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 KCNC1P48547 511 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 FLI1Q01543 452 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 N4BP2L1Q5TBK1 243 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 MROH9Q5TGP6 573 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 RETSATQ6NUM9 610 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 KIAA1324Q6UXG2 1013 aaKnown RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 CCDC36Q8IYA8 594 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 UNC5BQ8IZJ1 945 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 NAT8LQ8N9F0 302 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 PAPD5Q8NDF8 572 aaKnown RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 SVIPQ8NHG7 77 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 YIPF5Q969M3 257 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 PPWD1Q96BP3 646 aaKnown RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 ERLEC1Q96DZ1 483 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 SCRN2Q96FV2 425 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 MOGAT1Q96PD6 335 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 C6orf62Q9GZU0 229 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 COA4Q9NYJ1 87 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 IFT80Q9P2H3 777 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 TRMT6Q9UJA5 497 aaKnown RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 A0A087WV48 116 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 TUBAL3A6NHL2 446 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 ZBTB14O43829 449 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 ERGP11308 486 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 TPH1P17752 444 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 F8A1P23610 371 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 PSMB4P28070 264 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 HTR1BP28222 390 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 ERFP50548 548 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 ILKQ13418 452 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 TRIM25Q14258 630 aaKnown RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 FRG1Q14331 258 aaKnown RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 MTX3Q5HYI7 312 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 FAM209BQ5JX69 171 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 VWA5B1Q5TIE3 1220 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 GARNL3Q5VVW2 1013 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 BRAT1Q6PJG6 821 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 CLEC14AQ86T13 490 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 HID1Q8IV36 788 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 C7orf57Q8NEG2 295 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 HDAC2Q92769 488 aaKnown RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 BBS4Q96RK4 519 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 SPOCK3Q9BQ16 436 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 MMP27Q9H306 513 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 C12orf65Q9H3J6 166 aaKnown RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 GHITMQ9H3K2 345 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 ASCL3Q9NQ33 180 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 ELF5Q9UKW6 265 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 PIKFYVEQ9Y2I7 2098 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 UGT2B17O75795 530 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 METTL18O95568 372 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 ALPPP05187 535 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 HLA-DQB2P05538 268 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 CEACAM5P06731 702 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 UGT2B15P54855 530 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF273Q14593 569 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 PTPRRQ15256 657 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 CRTC3Q6UUV7 619 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 LIPIQ6XZB0 460 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 Q6ZVU0 165 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 TEX47Q8TBZ9 253 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 UTP15Q8TED0 518 aaKnown RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 SNAPC3Q92966 411 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 TESCQ96BS2 214 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 WBP1Q96G27 269 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 KLHL15Q96M94 604 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 RAB33BQ9H082 229 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 SLC6A15Q9H2J7 730 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 FSCN3Q9NQT6 498 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 PLSCR3Q9NRY6 295 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 CCM2LQ9NUG4 571 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-204ENST00000369530 CPNE7Q9UBL6 633 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 FBXL21Q9UKT6 434 aa6.61□□□□□ -1.35
CSDE1-204ENST00000369530 AGAP5A6NIR3 686 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 TRIM49D1C9J1S8 452 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 COPEO14579 308 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 CASC3O15234 703 aaKnown RBP6.6□□□□□ -1.35
CSDE1-204ENST00000369530 EPOP01588 193 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 RAB3AP20336 220 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF140P52738 457 aaPredicted RBP6.6□□□□□ -1.35
CSDE1-204ENST00000369530 VBP1P61758 197 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 UBE2IP63279 158 aaKnown RBP6.6□□□□□ -1.35
CSDE1-204ENST00000369530 CD83Q01151 205 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 CHI3L2Q15782 390 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 NRF1Q16656 503 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 UGP2Q16851 508 aa6.6□□□□□ -1.35
CSDE1-204ENST00000369530 ZNF789Q5FWF6 425 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms