RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 TOR1AIP1Q5JTV8 583 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 RNF175Q8N4F7 328 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 AFAP1L2Q8N4X5 818 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 TRPV3Q8NET8 790 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 OR2Y1Q8NGV0 311 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 ADAMTS17Q8TE56 1095 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 UTP15Q8TED0 518 aaKnown RBP14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 ZNF483Q8TF39 744 aaPredicted RBP14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 CCT6BQ92526 530 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 CDK15Q96Q40 435 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 SLC26A1Q9H2B4 701 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 SOX17Q9H6I2 414 aaPredicted RBP14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 NOL11Q9H8H0 719 aaKnown RBP14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 CDC14AQ9UNH5 594 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 RNF11Q9Y3C5 154 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 NAALAD2Q9Y3Q0 740 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 SLC22A7Q9Y694 548 aa14.3□□□□□ -0.12
SMPDL3A-201ENST00000368440 A0A1B0GTL3 188 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 G3V2L1 256 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 PPP6CO00743 305 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 PLIN3O60664 434 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 DNAJB6O75190 326 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 RDH16O75452 317 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 KLHL18O94889 574 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 NSA2O95478 260 aaKnown RBP14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 ALBP02768 609 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 PIM1P11309 404 aaPredicted RBP14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 TAC1P20366 129 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 FOLR3P41439 243 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 RAB8AP61006 207 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 LAPTM5Q13571 262 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 VWA2Q5GFL6 755 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 PAGE2BQ5JRK9 111 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 GRHL2Q6ISB3 625 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 METTL2BQ6P1Q9 378 aaKnown RBP14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 MYLK4Q86YV6 388 aaPredicted RBP14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 LAS2Q8IYD9 372 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 PRSS58Q8IYP2 241 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 STT3BQ8TCJ2 826 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 TTC9Q92623 222 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 EXTL1Q92935 676 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 C1QTNF3Q9BXJ4 246 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 FAM117AQ9C073 453 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 PITHD1Q9GZP4 211 aaPredicted RBP14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 ACTR8Q9H981 624 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 ANKHQ9HCJ1 492 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 KCNK9Q9NPC2 374 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 SEMA4BQ9NPR2 832 aaPredicted RBP14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 HCN3Q9P1Z3 774 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 TRPC4Q9UBN4 977 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 PADI2Q9Y2J8 665 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 ANKDD1BA6NHY2 528 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 VSTM2BA6NLU5 285 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 SERPINA6P08185 405 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 PCNAP12004 261 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 ALOX12P18054 663 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 ATP5F1P24539 256 aaPredicted RBP14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 AVPR1BP47901 424 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 CCT5P48643 541 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 PIK3CGP48736 1102 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 CDH13P55290 713 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 TRAF3Q13114 568 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 TBR1Q16650 682 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 DEFB109BQ30KR1 87 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 DEFB134Q4QY38 66 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 UNC50Q53HI1 259 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 TNFAIP8L3Q5GJ75 292 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 ZNF678Q5SXM1 525 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 PCSK4Q6UW60 755 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 BANPQ8N9N5 519 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 OR7G3Q8NG95 312 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 OR5T3Q8NGG3 340 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 APOPT1Q96IL0 206 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 YIPF2Q9BWQ6 316 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 RHBGQ9H310 441 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 WDR54Q9H977 334 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 GRID1Q9ULK0 1009 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 MAP4K5Q9Y4K4 846 aa14.29□□□□□ -0.12
SMPDL3A-201ENST00000368440 IGLV3-12A0A075B6K2 115 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 A0A0G2JN53 185 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 H0YIG0 161 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 GALR3O60755 368 aaPredicted RBP14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 SPAG7O75391 227 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 CLEC3AO75596 197 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 SMIM10L1P0DMW3 83 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 OTX2P32243 289 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 EFNA3P52797 238 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 HERVK_113P63132 956 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 OLR1P78380 273 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 GUCY1A3Q02108 690 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 HIST2H2ACQ16777 129 aaPredicted RBP14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 LIPJQ5W064 366 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 HIST2H2AA3Q6FI13 130 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 MED27Q6P2C8 311 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 LAPTM4BQ86VI4 370 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 ANKRD42Q8N9B4 389 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 TTLQ8NG68 377 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 MGARPQ8TDB4 240 aa14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 ZNF473Q8WTR7 871 aaKnown RBP14.28□□□□□ -0.12
SMPDL3A-201ENST00000368440 SMIM10Q96HG1 83 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms