RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 EHD1Q9H4M9 534 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 NT5DC2Q9H857 520 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 CNOT10Q9H9A5 744 aaKnown RBP17.89■□□□□ 0.45
CKS1B-203ENST00000368439 SNX15Q9NRS6 342 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 NUDT4Q9NZJ9 180 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 CD274Q9NZQ7 290 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 LUZP4Q9P127 313 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 ACOT9Q9Y305 439 aa17.89■□□□□ 0.45
CKS1B-203ENST00000368439 PRRC2CQ9Y520 2896 aaKnown RBP17.89■□□□□ 0.45
CKS1B-203ENST00000368439 A0A087X1B8 175 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 NSG1A0A0A6YYJ2 146 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 TTLL8A6PVC2 850 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 KERAO60938 352 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 ACSL3O95573 720 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 SERPINA6P08185 405 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 C8orf89P0DMQ9 161 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 CD22P20273 847 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 RHAGQ02094 409 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 SLBPQ14493 270 aaKnown RBP eCLIP17.88■□□□□ 0.45
CKS1B-203ENST00000368439 AGAP7PQ5VUJ5 663 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 TMIGD1Q6UXZ0 262 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 LANCL3Q6ZV70 420 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 VN1R5Q7Z5H4 357 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 SLC44A1Q8WWI5 657 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 EXT2Q93063 718 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 PEX11GQ96HA9 241 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 IMMP1LQ96LU5 166 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 AGAP4Q96P64 663 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 GPR78Q96P69 363 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 CD244Q9BZW8 370 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 ZNF490Q9ULM2 529 aaPredicted RBP17.88■□□□□ 0.45
CKS1B-203ENST00000368439 CSAG2Q9Y5P2 127 aa17.88■□□□□ 0.45
CKS1B-203ENST00000368439 UBXN8O00124 270 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 CHST10O43529 356 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 H2AFYO75367 372 aaKnown RBP17.87■□□□□ 0.45
CKS1B-203ENST00000368439 SERPINA7P05543 415 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 CELA2AP08217 269 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 PRR35P0CG20 571 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 IL10P22301 178 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 MAGEA12P43365 314 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 RAB8AP61006 207 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 OLR1P78380 273 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 UAP1Q16222 522 aaPredicted RBP17.87■□□□□ 0.45
CKS1B-203ENST00000368439 PDK4Q16654 411 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 MINDY4Q4G0A6 757 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 PRR30Q53SZ7 412 aaPredicted RBP17.87■□□□□ 0.45
CKS1B-203ENST00000368439 CRB2Q5IJ48 1285 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 NIPAL1Q6NVV3 410 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 Q6ZS92 163 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 ABHD13Q7L211 337 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 CCDC91Q7Z6B0 441 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 KBTBD2Q8IY47 623 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 PLPP5Q8NEB5 264 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 RHEBL1Q8TAI7 183 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 CPT1CQ8TCG5 803 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 UBTD2Q8WUN7 234 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 ISL2Q96A47 359 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 TRIM44Q96DX7 344 aaPredicted RBP17.87■□□□□ 0.45
CKS1B-203ENST00000368439 OR1F2PQ96R84 312 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 WDR77Q9BQA1 342 aaPredicted RBP17.87■□□□□ 0.45
CKS1B-203ENST00000368439 PITHD1Q9GZP4 211 aaPredicted RBP17.87■□□□□ 0.45
CKS1B-203ENST00000368439 RIC8BQ9NVN3 520 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 B3GNT3Q9Y2A9 372 aa17.87■□□□□ 0.45
CKS1B-203ENST00000368439 A0A096LPK6 155 aa17.86■□□□□ 0.45
CKS1B-203ENST00000368439 HNRNPH1P31943 449 aaKnown RBP17.86■□□□□ 0.45
CKS1B-203ENST00000368439 SOX11P35716 441 aa17.86■□□□□ 0.45
CKS1B-203ENST00000368439 HNF4AP41235 474 aa17.86■□□□□ 0.45
CKS1B-203ENST00000368439 AGTR2P50052 363 aa17.86■□□□□ 0.45
CKS1B-203ENST00000368439 PCDH1Q08174 1060 aa17.86■□□□□ 0.45
CKS1B-203ENST00000368439 DOC2AQ14183 400 aa17.86■□□□□ 0.45
CKS1B-203ENST00000368439 INPP5JQ15735 1006 aaPredicted RBP17.86■□□□□ 0.45
CKS1B-203ENST00000368439 TOR1AIP1Q5JTV8 583 aa17.86■□□□□ 0.45
CKS1B-203ENST00000368439 ADNP2Q6IQ32 1131 aa17.86■□□□□ 0.45
CKS1B-203ENST00000368439 LRRC70Q7Z2Q7 622 aa17.86■□□□□ 0.45
CKS1B-203ENST00000368439 CPEB2Q7Z5Q1 589 aaKnown RBP17.86■□□□□ 0.45
CKS1B-203ENST00000368439 ANKRD37Q7Z713 158 aa17.86■□□□□ 0.45
CKS1B-203ENST00000368439 ZADH2Q8N4Q0 377 aa17.86■□□□□ 0.45
CKS1B-203ENST00000368439 TTLQ8NG68 377 aa17.86■□□□□ 0.45
CKS1B-203ENST00000368439 TM9SF4Q92544 642 aa17.86■□□□□ 0.45
CKS1B-203ENST00000368439 PTCD3Q96EY7 689 aaKnown RBP17.86■□□□□ 0.45
CKS1B-203ENST00000368439 SEC16BQ96JE7 1060 aa17.86■□□□□ 0.45
CKS1B-203ENST00000368439 RBCK1Q9BYM8 510 aa17.86■□□□□ 0.45
CKS1B-203ENST00000368439 CLK4Q9HAZ1 481 aaKnown RBP17.86■□□□□ 0.45
CKS1B-203ENST00000368439 NFU1Q9UMS0 254 aa17.86■□□□□ 0.45
CKS1B-203ENST00000368439 IGHV3-20A0A0C4DH32 117 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 CCDC189A1A4V9 331 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 URADA6NGE7 173 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 SUPT3HB4E1H0 165 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 CLGNO14967 610 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 KLK8O60259 260 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 CCNT2O60583 730 aaKnown RBP17.85■□□□□ 0.45
CKS1B-203ENST00000368439 SUPT3HO75486 399 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 WFS1O76024 890 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 KLHL2O95198 593 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 S100BP04271 92 aaPredicted RBP17.85■□□□□ 0.45
CKS1B-203ENST00000368439 FHP07954 510 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 GSTM2P28161 218 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 CASP2P42575 452 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 SERPINB8P50452 374 aa17.85■□□□□ 0.45
CKS1B-203ENST00000368439 ACAP2Q15057 778 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms