RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 TMEM189-UBE2V1I3L0A0 370 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 NRG2O14511 850 aaPredicted RBP8.55□□□□□ -1.04
THBS3-201ENST00000368378 GAPDHSO14556 408 aaPredicted RBP8.55□□□□□ -1.04
THBS3-201ENST00000368378 PCDH17O14917 1159 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 IGHA2P01877 340 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 TNNI3P19429 210 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 CD40LGP29965 261 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 CAV3P56539 151 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 RPS13P62277 151 aaKnown RBP8.55□□□□□ -1.04
THBS3-201ENST00000368378 MRPL58Q14197 206 aaKnown RBP8.55□□□□□ -1.04
THBS3-201ENST00000368378 VEPH1Q14D04 833 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 KIAA0040Q15053 153 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 TSTQ16762 297 aaKnown RBP8.55□□□□□ -1.04
THBS3-201ENST00000368378 UGT8Q16880 541 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 SPATS1Q496A3 300 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 TPRG1LQ5T0D9 272 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 GPRC6AQ5T6X5 926 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 RETSATQ6NUM9 610 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 DEF8Q6ZN54 512 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 TRMT11Q7Z4G4 463 aaKnown RBP8.55□□□□□ -1.04
THBS3-201ENST00000368378 GPR149Q86SP6 731 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 ZNF605Q86T29 641 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 ENTHD1Q8IYW4 607 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 IQCF1Q8N6M8 205 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 PCSK9Q8NBP7 692 aaKnown RBP8.55□□□□□ -1.04
THBS3-201ENST00000368378 CPPED1Q9BRF8 314 aaPredicted RBP8.55□□□□□ -1.04
THBS3-201ENST00000368378 DUSP26Q9BV47 211 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 PRR14Q9BWN1 585 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 QPCTLQ9NXS2 382 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 OARD1Q9Y530 152 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 ANTXRLA6NF34 631 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 ARNTLO00327 626 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 INPPL1O15357 1258 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 SLC16A8O95907 504 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 NPPAP01160 153 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 ZDHHC11BP0C7U3 371 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 HOXA9P31269 272 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 B4GALNT1Q00973 533 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 ABHD18Q0P651 414 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 MAD2L1Q13257 205 aaPredicted RBP8.55□□□□□ -1.04
THBS3-201ENST00000368378 MAD2L1BPQ15013 274 aaPredicted RBP8.55□□□□□ -1.04
THBS3-201ENST00000368378 EXOC3L2Q2M3D2 409 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 RFX4Q33E94 735 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 CPTPQ5TA50 214 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 KIAA1614Q5VZ46 1190 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 PLEKHG7Q6ZR37 379 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 DDX53Q86TM3 631 aaKnown RBP8.55□□□□□ -1.04
THBS3-201ENST00000368378 BPHLQ86WA6 291 aaPredicted RBP8.55□□□□□ -1.04
THBS3-201ENST00000368378 TRAPPC5Q8IUR0 188 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 TRIM48Q8IWZ4 208 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 SLC34A3Q8N130 599 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 LGI4Q8N135 537 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 TERB1Q8NA31 727 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 SETD9Q8NE22 299 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 ATL1Q8WXF7 558 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 ART5Q96L15 291 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 DOK1Q99704 481 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 GORASP2Q9H8Y8 452 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 ZNF334Q9HCZ1 680 aaPredicted RBP8.55□□□□□ -1.04
THBS3-201ENST00000368378 DKK3Q9UBP4 350 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 SAMD4AQ9UPU9 718 aaKnown RBP8.55□□□□□ -1.04
THBS3-201ENST00000368378 RNF6Q9Y252 685 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 CCL26Q9Y258 94 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 CCL27Q9Y4X3 112 aa8.55□□□□□ -1.04
THBS3-201ENST00000368378 ANKDD1BA6NHY2 528 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 GABRR3A8MPY1 467 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 LOC110117498-PIK3R3F6TDL0 507 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 TSPAN6O43657 245 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 SNX4O95219 450 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 KCNK5O95279 499 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 RPLP2P05387 115 aaKnown RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 CD22P20273 847 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 SERPINA4P29622 427 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 SLC35A2P78381 396 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 LSM11P83369 360 aaKnown RBP eCLIP8.54□□□□□ -1.04
THBS3-201ENST00000368378 TLE2Q04725 743 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 DOC2AQ14183 400 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 OXA1LQ15070 435 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 PAQR6Q6TCH4 344 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 RNF130Q86XS8 419 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 GHDCQ8N2G8 530 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 SVOPLQ8N434 492 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 LINC00469Q8N7U9 141 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 SLAIN1Q8ND83 568 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 OR10G2Q8NGC3 310 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 TTYH2Q9BSA4 534 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 WDR12Q9GZL7 423 aaKnown RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 GPN2Q9H9Y4 310 aaPredicted RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 HCFC1R1Q9NWW0 138 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 TMEM9Q9P0T7 183 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 YIPF1Q9Y548 306 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 GRXCR2A6NFK2 248 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 KPNA3O00505 521 aaPredicted RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 LATO43561 262 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 HYAL3O43820 417 aaPredicted RBP8.54□□□□□ -1.04
THBS3-201ENST00000368378 CCNKO75909 580 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 KLK1P06870 262 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 OR56A5P0C7T3 313 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 EBLN1P0CF75 366 aa8.54□□□□□ -1.04
THBS3-201ENST00000368378 HLA-EP13747 358 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms