RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 RBM48Q5RL73 367 aaKnown RBP12.46□□□□□ -0.41
PTPRK-207ENST00000368226 CCSAPQ6IQ19 270 aaPredicted RBP12.46□□□□□ -0.41
PTPRK-207ENST00000368226 OR6N1Q8NGY5 312 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 SLC29A3Q9BZD2 475 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 TMEM59LQ9UK28 342 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 MAU2Q9Y6X3 613 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 FABP12A6NFH5 140 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 CAPN14A8MX76 684 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 MAFKO60675 156 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 ASGR2P07307 311 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 CDKN2DP55273 166 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 DGLUCYQ7Z3D6 616 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 LMO3Q8TAP4 145 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 C1orf74Q96LT6 269 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 CST11Q9H112 138 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 TOR3AQ9H497 397 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 PRTFDC1Q9NRG1 225 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 ATXN7L1Q9ULK2 861 aaPredicted RBP12.46□□□□□ -0.41
PTPRK-207ENST00000368226 RPL36Q9Y3U8 105 aaKnown RBP12.46□□□□□ -0.41
PTPRK-207ENST00000368226 PIAS3Q9Y6X2 628 aa12.46□□□□□ -0.41
PTPRK-207ENST00000368226 SOX1O00570 391 aaPredicted RBP12.46□□□□□ -0.42
PTPRK-207ENST00000368226 RNF13O43567 381 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 TLX2O43763 284 aaPredicted RBP12.46□□□□□ -0.42
PTPRK-207ENST00000368226 CD36P16671 472 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 BCAP31P51572 246 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 CAPZA1P52907 286 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 EEFSECP57772 596 aaKnown RBP12.46□□□□□ -0.42
PTPRK-207ENST00000368226 PDCD4Q53EL6 469 aaKnown RBP12.46□□□□□ -0.42
PTPRK-207ENST00000368226 SLC30A8Q8IWU4 369 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 SLC2A13Q96QE2 648 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 PKP2Q99959 881 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 LINC00597Q9H2U6 94 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 MEAF6Q9HAF1 191 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 FAM221BA6H8Z2 402 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 PTGESO14684 152 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 LAMTOR5O43504 91 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 GP1BBP13224 206 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 CYBAP13498 195 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 ALDH3A2P51648 485 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 RPS26P62854 115 aaKnown RBP12.46□□□□□ -0.42
PTPRK-207ENST00000368226 PUDPQ08623 228 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 ZNF101Q8IZC7 436 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.46□□□□□ -0.42
PTPRK-207ENST00000368226 TNFRSF10DQ9UBN6 386 aa12.46□□□□□ -0.42
PTPRK-207ENST00000368226 RTCAO00442 366 aaKnown RBP12.45□□□□□ -0.42
PTPRK-207ENST00000368226 CREG1O75629 220 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 IL3P08700 152 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 PIM1P11309 404 aaPredicted RBP12.45□□□□□ -0.42
PTPRK-207ENST00000368226 C6P13671 934 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 FECHP22830 423 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 GABRA3P34903 492 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 ADAM8P78325 824 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 PTGR1Q14914 329 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 SWI5Q1ZZU3 235 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 DEFB110Q30KQ9 67 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 OR2T5Q6IEZ7 315 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 RAB43Q86YS6 212 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 JAGN1Q8N5M9 183 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 RASGEF1AQ8N9B8 481 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 CHST14Q8NCH0 376 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 OR2T29Q8NH02 315 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 OR8K3Q8NH51 312 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 C7orf43Q8WVR3 580 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 SLCO2A1Q92959 643 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 ASB9Q96DX5 294 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 WDR92Q96MX6 357 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 APOBEC3BQ9UH17 382 aaKnown RBP12.45□□□□□ -0.42
PTPRK-207ENST00000368226 MAFFQ9ULX9 164 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 IFI30P13284 250 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 ARFRP1Q13795 201 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 TMEM107Q6UX40 140 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 C12orf40Q86WS4 652 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 MARCH9Q86YJ5 346 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 TMEM125Q96AQ2 219 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 ZNF641Q96N77 438 aaPredicted RBP12.45□□□□□ -0.42
PTPRK-207ENST00000368226 ALPK1Q96QP1 1244 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 MED28Q9H204 178 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 DNAJC27Q9NZQ0 273 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 FAM227AF5H4B4 570 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 CLEC3AO75596 197 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 BMP8BP34820 402 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 GJA5P36382 358 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 TBPL1P62380 186 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 RUNX3Q13761 415 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 FLYWCH1Q4VC44 716 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 BICRALQ6AI39 1079 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 BMP8AQ7Z5Y6 402 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 IMP4Q96G21 291 aaKnown RBP12.45□□□□□ -0.42
PTPRK-207ENST00000368226 PYURFQ96I23 114 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 GRHPRQ9UBQ7 328 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 APOL3O95236 402 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 ANXA8P13928 327 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.45□□□□□ -0.423e-6■■■■□ 20.2
PTPRK-207ENST00000368226 LIN52Q52LA3 116 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 KLHL26Q53HC5 615 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 IER5LQ5T953 404 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 MAMDC4Q6UXC1 1216 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 IL22RA1Q8N6P7 574 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 BIRC7Q96CA5 298 aa12.45□□□□□ -0.42
PTPRK-207ENST00000368226 CAMK1GQ96NX5 476 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms