RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 ASGR2P07307 311 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 SLC35G4P0C7Q5 338 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 TNFRSF4P43489 277 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 TPD52P55327 224 aaPredicted RBP13.45□□□□□ -0.26
USF1-202ENST00000368020 CTBSQ01459 385 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 DMPKQ09013 629 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 LRRC23Q53EV4 343 aaPredicted RBP13.45□□□□□ -0.26
USF1-202ENST00000368020 AGBL4Q5VU57 503 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 OR2T5Q6IEZ7 315 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 XKR5Q6UX68 686 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 TMEM26Q6ZUK4 368 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 ARL10Q8N8L6 244 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 SETD9Q8NE22 299 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 GPR156Q8NFN8 814 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 OR4A15Q8NGL6 344 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 OR2T29Q8NH02 315 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 ZNF420Q8TAQ5 688 aaPredicted RBP13.45□□□□□ -0.26
USF1-202ENST00000368020 ZFP90Q8TF47 636 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 HDAC2Q92769 488 aaKnown RBP13.45□□□□□ -0.26
USF1-202ENST00000368020 NMD3Q96D46 503 aaKnown RBP13.45□□□□□ -0.26
USF1-202ENST00000368020 CNDP2Q96KP4 475 aaKnown RBP13.45□□□□□ -0.26
USF1-202ENST00000368020 RHBGQ9H310 441 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 TOR3AQ9H497 397 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 WDR26Q9H7D7 661 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 NT5DC2Q9H857 520 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 SLC24A3Q9HC58 644 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 PHPT1Q9NRX4 125 aaPredicted RBP13.45□□□□□ -0.26
USF1-202ENST00000368020 FAM118AQ9NWS6 357 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 SH3BP4Q9P0V3 963 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 FZD4Q9ULV1 537 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 CEPT1Q9Y6K0 416 aa13.45□□□□□ -0.26
USF1-202ENST00000368020 PLK4O00444 970 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 SEC24DO94855 1032 aaPredicted RBP13.44□□□□□ -0.26
USF1-202ENST00000368020 PCDH8O95206 1070 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 SEMG1P04279 462 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 PCCBP05166 539 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 FURINP09958 794 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 ITGAMP11215 1152 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 DNAJA1P31689 397 aaKnown RBP13.44□□□□□ -0.26
USF1-202ENST00000368020 DRD3P35462 400 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 GABARAPL2P60520 117 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 RGNQ15493 299 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 EGFLAMQ63HQ2 1017 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 ZNF776Q68DI1 518 aaPredicted RBP13.44□□□□□ -0.26
USF1-202ENST00000368020 TRIM40Q6P9F5 258 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 ISLR2Q6UXK2 745 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 HORMAD1Q86X24 394 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 PTOV1Q86YD1 416 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 OFCC1Q8IZS5 231 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 CLECL1Q8IZS7 167 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 SMPDL3AQ92484 453 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 WASH6PQ9NQA3 447 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 SPTBN5Q9NRC6 3674 aaKnown RBP13.44□□□□□ -0.26
USF1-202ENST00000368020 CIDEBQ9UHD4 219 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 DUSP12Q9UNI6 340 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 FAF1Q9UNN5 650 aaPredicted RBP13.44□□□□□ -0.26
USF1-202ENST00000368020 PIAS3Q9Y6X2 628 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 HSPE1-MOB4S4R3N1 261 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 NUP214P35658 2090 aaPredicted RBP13.44□□□□□ -0.26
USF1-202ENST00000368020 EME2A4GXA9 379 aaPredicted RBP13.44□□□□□ -0.26
USF1-202ENST00000368020 IGLON5A6NGN9 336 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 ANKDD1BA6NHY2 528 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 SLC16A6O15403 523 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 KDM1AO60341 852 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 NOBOXO60393 691 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 GPR37L1O60883 481 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 UGT2B11O75310 529 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 KRT75O95678 551 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 IFNA14P01570 189 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 NELFEP18615 380 aaKnown RBP13.44□□□□□ -0.26
USF1-202ENST00000368020 FPR1P21462 350 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 TRIM23P36406 574 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 GALK1P51570 392 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 CCR8P51685 355 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 RPS21P63220 83 aaKnown RBP13.44□□□□□ -0.26
USF1-202ENST00000368020 SLC14A1Q13336 389 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 FAM71E1Q6IPT2 247 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 KIAA1161Q6NSJ0 714 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 ZNF773Q6PK81 442 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 FAM129CQ86XR2 697 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 ERI1Q8IV48 349 aaKnown RBP13.44□□□□□ -0.26
USF1-202ENST00000368020 CHPFQ8IZ52 775 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 C10orf111Q8N326 155 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 PLA2G15Q8NCC3 412 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 C16orf78Q8WTQ4 265 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 ZNF764Q96H86 408 aaPredicted RBP13.44□□□□□ -0.26
USF1-202ENST00000368020 MAGED4Q96JG8 741 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 MUS81Q96NY9 551 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 TIMM29Q9BSF4 260 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 CHST8Q9H2A9 424 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 TIMMDC1Q9NPL8 285 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 TMEM98Q9Y2Y6 226 aa13.44□□□□□ -0.26
USF1-202ENST00000368020 MID1O15344 667 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 HS6ST1O60243 411 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 TBX19O60806 448 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 FKBP9O95302 570 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 RYKP34925 604 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 ITGA1P56199 1179 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 SPIDRQ14159 915 aa13.43□□□□□ -0.26
USF1-202ENST00000368020 WSCD2Q2TBF2 565 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms