RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 TMEM74Q96NL1 305 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 METP08581 1390 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 T-ENOLP0DO92 83 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 MVKQ03426 396 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 ZNF529Q6P280 563 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 TRMT10AQ8TBZ6 339 aaKnown RBP10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 TCF7L1Q9HCS4 588 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 KIAA2026Q5HYC2 2103 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 A0A1W2PPL8 197 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 TCRBV7S3A2A0A539 114 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 OTCP00480 354 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 INSRRP14616 1297 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 WASP42768 502 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 ARCN1P48444 511 aaKnown RBP10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 ZNF616Q08AN1 781 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 APOLD1Q96LR9 279 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 WRAP53Q9BUR4 548 aaKnown RBP10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 FGBP02675 491 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 LTKP29376 864 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 SOX3P41225 446 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 ALDH3B1P43353 468 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 SCNN1GP51170 649 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 PPP5CP53041 499 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 C6orf141Q5SZD1 244 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.75□□□□□ -0.692e-7■■□□□ 13
CDC42BPA-205ENST00000366769 ACER1Q8TDN7 264 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 GPR152Q8TDT2 470 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 CREBZFQ9NS37 354 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 PCYT1BQ9Y5K3 369 aaPredicted RBP10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 E5RJQ4 531 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 HSPA12AO43301 675 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 NR2C1P13056 603 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 GRIA1P42261 906 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 PDZD11Q5EBL8 140 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 HCAR2Q8TDS4 363 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 CASTOR1Q8WTX7 329 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 ULBP1Q9BZM6 244 aa10.75□□□□□ -0.69
CDC42BPA-205ENST00000366769 HECW2Q9P2P5 1572 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 H2AFB2P0C5Z0 115 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 CXCR3P49682 368 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 FOXM1Q08050 763 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 OR8D1Q8WZ84 308 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 COPS8Q99627 209 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 ZYG11BQ9C0D3 744 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 DZANK1Q9NVP4 752 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 ITGA5P08648 1049 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 SENP8Q96LD8 212 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 RNF208Q9H0X6 261 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 NFASCO94856 1347 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 M0R129 80 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 ENTPD6O75354 484 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 DUSP6Q16828 381 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 ZNF709Q8N972 641 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 RHBDF1Q96CC6 855 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 SOCS7O14512 581 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 KCNJ13O60928 360 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 SNAPINO95295 136 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 CKMT1AP12532 417 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 MAP3K8P41279 467 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 CLCN7P51798 805 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 ALG10BQ5I7T1 473 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 WSCD1Q658N2 575 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 TTLL10Q6ZVT0 673 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 SUN3Q8TAQ9 357 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 LIN37Q96GY3 246 aaPredicted RBP10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 PLGLB1Q02325 96 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 GPR151Q8TDV0 419 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 COL21A1Q96P44 957 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 TSSK3Q96PN8 268 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 TSSK6Q9BXA6 273 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 LGR4Q9BXB1 951 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 EIF5A2Q9GZV4 153 aaKnown RBP10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 POLR2J3Q9H1A7 115 aaKnown RBP10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 ABCD2Q9UBJ2 740 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 GIMAP2Q9UG22 337 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 LCHNA4D1U4 455 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 NKRFO15226 690 aaKnown RBP eCLIP10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 TRAPPC6AO75865 159 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 HSD11B1P28845 292 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 ARSFP54793 590 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 OC90Q02509 493 aaPredicted RBP10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 ZNF311Q5JNZ3 666 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 HFE2Q6ZVN8 426 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 ARL11Q969Q4 196 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 LGALS12Q96DT0 336 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 TCAF1Q9Y4C2 921 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 hCG_1807616A0A1W2PRN6 198 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 WASH3PC4AMC7 463 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 PRICKLE3O43900 615 aaPredicted RBP10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 NDST3O95803 873 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 IFNW1P05000 195 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 PTNP21246 168 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 SEC13P55735 322 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 LRRC38Q5VT99 294 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 SDHAF4Q5VUM1 108 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 AQP12AQ8IXF9 295 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 CPA6Q8N4T0 437 aa10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 PNLDC1Q8NA58 520 aaKnown RBP10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 RC3H2Q9HBD1 1191 aaKnown RBP10.74□□□□□ -0.69
CDC42BPA-205ENST00000366769 HLCSP50747 726 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms