RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 C4orf51C9J302 202 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TAPBPO15533 448 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CHST10O43529 356 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ZNF888P0CJ79 500 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 GDF5P43026 501 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TDGF1P3P51864 188 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CALCOCO2Q13137 446 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TGFBIQ15582 683 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ZKSCAN8Q15776 578 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 C18orf21Q32NC0 220 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 DEFB134Q4QY38 66 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 NIPAL1Q6NVV3 410 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SLCO4C1Q6ZQN7 724 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ZNF572Q7Z3I7 529 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ADAMTSL2Q86TH1 951 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TRPV3Q8NET8 790 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TSLPQ969D9 159 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 UBXN10Q96LJ8 280 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 GPR22Q99680 433 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 RBBP8Q99708 897 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 AIF1LQ9BQI0 150 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 KLHL31Q9H511 634 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CAB39LQ9H9S4 337 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 MMP25Q9NPA2 562 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SAYSD1Q9NPB0 183 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 STMN3Q9NZ72 180 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CTNNAL1Q9UBT7 734 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 DYRK1BQ9Y463 629 aa12.87□□□□□ -0.35
TNFRSF1A-202ENST00000366159 OR5H15A6NDH6 313 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PRAMEF4O60810 478 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CLDN1O95832 211 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TBX6O95947 436 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 FHP07954 510 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SERPINA6P08185 405 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 GSTA2P09210 222 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 C1GALT1C1LP0DN25 315 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CD1DP15813 335 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 GNAZP19086 355 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ETF1P62495 437 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 RGS1Q08116 209 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 C2orf54Q08AI8 447 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ABRAXAS2Q15018 415 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TRADDQ15628 312 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 NSDHLQ15738 373 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 EXT1Q16394 746 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 BTBD16Q32M84 506 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SFT2D3Q587I9 215 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CDKL4Q5MAI5 379 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 MFSD4BQ5TF39 518 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PRAMEF9Q5VWM5 478 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 HIST2H2BCQ6DN03 193 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ZDHHC24Q6UX98 284 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CAPN12Q6ZSI9 719 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 C3orf62Q6ZUJ4 267 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ABHD13Q7L211 337 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TMPRSS11BQ86T26 416 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TBC1D19Q8N5T2 526 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 BCORP1Q8N888 145 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TBC1D20Q96BZ9 403 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CPNE1Q99829 537 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TMEM79Q9BSE2 394 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 NT5DC2Q9H857 520 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PCDHGB6Q9Y5F9 930 aa12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.86□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ITPR2Q14571 2701 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 IGKV3D-11A0A0A0MRZ8 115 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CDC123O75794 336 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 F10P00742 488 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 STSP08842 583 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CCDC166P0CW27 439 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 KCNC1P48547 511 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 OLR1P78380 273 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 GUCY2DQ02846 1103 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 E2F2Q14209 437 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ELOAQ14241 798 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 USP10Q14694 798 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ACER2Q5QJU3 275 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ABHD17BQ5VST6 288 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PAPD4Q6PIY7 484 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 FAM180AQ6UWF9 173 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 QSOX2Q6ZRP7 698 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 C17orf53Q8N3J3 647 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SPATA6LQ8N4H0 392 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 FBXO25Q8TCJ0 367 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 ELP5Q8TE02 316 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 EGFL8Q99944 293 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 RBCK1Q9BYM8 510 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 OLAHQ9NV23 265 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 GPRC5BQ9NZH0 403 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 TEKT2Q9UIF3 430 aa12.85□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PHGDHO43175 533 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 MAN1A2O60476 641 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 PRAMEF2O60811 474 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 WDR47O94967 919 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SERPIND1P05546 499 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 JAK1P23458 1154 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 CASQ1P31415 396 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 GP5P40197 560 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 SLC26A5P58743 744 aa12.84□□□□□ -0.35
TNFRSF1A-202ENST00000366159 RAB8AP61006 207 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms