RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 CCDC175P0C221 793 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 FAM86B2P0C5J1 330 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 PDGFRAP16234 1089 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 GPR183P32249 361 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 ZFP36L2P47974 494 aaKnown RBP3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 KHKP50053 298 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 NUCB1Q02818 461 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 C15orf32Q32M92 178 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 HIGD2BQ4VC39 106 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 TCP11X2Q5H9J9 407 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 SPANXN4Q5MJ08 99 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 SEL1L3Q68CR1 1132 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 REG3GQ6UW15 175 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 PRSS55Q6UWB4 352 aaPredicted RBP3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 CLEC4GQ6UXB4 293 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 Q6ZR54 194 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 KRT74Q7RTS7 529 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 PRUNE1Q86TP1 453 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 OR8H2Q8N162 312 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 RTL3Q8N8U3 475 aaKnown RBP3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 ST6GALNAC6Q969X2 333 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 OR10A4Q9H209 315 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 C3orf14Q9HBI5 128 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 CHCHD3Q9NX63 227 aaKnown RBP3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 KLK11Q9UBX7 282 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 SLC12A6Q9UHW9 1150 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 PILRAQ9UKJ1 303 aa3.55□□□□□ -1.84
RNU4-28P-201ENST00000364739 TRAV18A0A075B6X5 111 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 DLATP10515 647 aaKnown RBP3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 AZU1P20160 251 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 GIFP27352 417 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 PTENP60484 403 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 ERVK-16P61578 105 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 IL10RBQ08334 325 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 TNK1Q13470 666 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 LRRC37A5PQ49AS3 106 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 C6orf136Q5SQH8 315 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 C11orf57Q6ZUT1 292 aaPredicted RBP3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 ADCK2Q7Z695 626 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 ABI3BPQ7Z7G0 1075 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 RNF130Q86XS8 419 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 ZNF584Q8IVC4 421 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 IQUBQ8NA54 791 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 TYMSOSQ8TAI1 123 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 HEXDCQ8WVB3 486 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 CNDP2Q96KP4 475 aaKnown RBP3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 ATF6BQ99941 703 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 JPT2Q9H910 190 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 IARS2Q9NSE4 1012 aaKnown RBP3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 TMOD3Q9NYL9 352 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 AGTPBP1Q9UPW5 1226 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 NCKAP1Q9Y2A7 1128 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 TTLL3Q9Y4R7 772 aa3.54□□□□□ -1.84
RNU4-28P-201ENST00000364739 PDHXO00330 501 aa3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 GPRIN2O60269 458 aa3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 ANKRD34CP0C6C1 535 aa3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 SPP1P10451 314 aa3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 PSMA3P25788 255 aa3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 CDX1P47902 265 aaPredicted RBP3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 RAD23AP54725 363 aa3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 TRMT11Q7Z4G4 463 aaKnown RBP3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 COX8CQ7Z4L0 72 aa3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 KCNMB4Q86W47 210 aa3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 DND1Q8IYX4 353 aaKnown RBP3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 PRSS35Q8N3Z0 413 aa3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 KIF18AQ8NI77 898 aa3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 OCC1Q8TAD7 63 aa3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 RAD54LQ92698 747 aa3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 PAPOLGQ9BWT3 736 aaKnown RBP3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 SNX7Q9UNH6 387 aa3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 KLK4Q9Y5K2 254 aa3.53□□□□□ -1.84
RNU4-28P-201ENST00000364739 KIAA1217Q5T5P2 1943 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 ZNF840PA6NDX5 716 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 RPL37AP8A6NKH3 93 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 TMEM150CB9EJG8 249 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 TRAFD1O14545 582 aaPredicted RBP3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 PPIP5K2O43314 1243 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 PLOD3O60568 738 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 HPP00738 406 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 CALCAP01258 141 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 ADORA3P0DMS8 318 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 FDPSP14324 419 aaKnown RBP3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 GOT1P17174 413 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 PTAFRP25105 342 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 PKLRP30613 574 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 FEN1P39748 380 aaKnown RBP3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 PRKCIP41743 596 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 NPY4RP50391 375 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 ABCE1P61221 599 aaKnown RBP3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 SIX1Q15475 284 aaPredicted RBP3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 MLF2Q15773 248 aaPredicted RBP3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 UPP1Q16831 310 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 FAM174BQ3ZCQ3 159 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 Q71RC1 249 aaPredicted RBP3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 ERN2Q76MJ5 926 aaKnown RBP3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 PHC2Q8IXK0 858 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 TEX26Q8N6G2 289 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 SUMF1Q8NBK3 374 aa3.52□□□□□ -1.85
RNU4-28P-201ENST00000364739 OR5M9Q8NGP3 310 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms