RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 CDKN2DP55273 166 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 CLDN10P78369 228 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 KLHL22Q53GT1 634 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 NANOGNBQ7Z5D8 188 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 ADGRD2Q7Z7M1 963 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 P2RY8Q86VZ1 359 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 GATSQ8NAP1 163 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 SETD6Q8TBK2 473 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 PEX13Q92968 403 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 CDCA3Q99618 268 aaPredicted RBP17.94■□□□□ 0.46
CLIP2-202ENST00000361545 TCF7L1Q9HCS4 588 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 DKKL1Q9UK85 242 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 BLOC1S5-TXNDC5H3BN57 136 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 KLF11O14901 512 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 PDYNP01213 254 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 EN2P19622 333 aaPredicted RBP17.94■□□□□ 0.46
CLIP2-202ENST00000361545 CD72P21854 359 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 NFE2L1Q14494 772 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 NNATQ16517 81 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 TCEAL6Q6IPX3 200 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 KLHL31Q9H511 634 aa17.94■□□□□ 0.46
CLIP2-202ENST00000361545 NPIPA5E9PKD4 350 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 MPC1LP0DKB6 136 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 GP1BBP13224 206 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 SLC18A1P54219 525 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 NOXRED1Q6NXP6 359 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 NRROSQ86YC3 692 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 DGCR14Q96DF8 476 aaKnown RBP17.93■□□□□ 0.46
CLIP2-202ENST00000361545 ZNF382Q96SR6 550 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 REEP4Q9H6H4 257 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 ZBTB26Q9HCK0 441 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 NPIPA1Q9UND3 350 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 A0A0U1RQS6 177 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 SERPINA3P01011 423 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 HMGN1P05114 100 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 RNF144AP50876 292 aaPredicted RBP17.93■□□□□ 0.46
CLIP2-202ENST00000361545 ZNF41P51814 821 aaPredicted RBP17.93■□□□□ 0.46
CLIP2-202ENST00000361545 LIPJQ5W064 366 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 LRRC17Q8N6Y2 441 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 DOK4Q8TEW6 326 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 PM20D1Q6GTS8 502 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 OR2T5Q6IEZ7 315 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 CHRDL2Q6WN34 429 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 ATG14Q6ZNE5 492 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 RASSF6Q6ZTQ3 369 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 PJA1Q8NG27 643 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 OR2T29Q8NH02 315 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 HSH2DQ96JZ2 352 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 C1QTNF1Q9BXJ1 281 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 OR2B3O76000 313 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 ALDOAP04075 364 aaKnown RBP17.93■□□□□ 0.46
CLIP2-202ENST00000361545 AZGP1P25311 298 aaKnown RBP17.93■□□□□ 0.46
CLIP2-202ENST00000361545 ZNF252P-AS1Q0IIN9 211 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 DAG1Q14118 895 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 PTGR1Q14914 329 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 KCTD8Q6ZWB6 473 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 TMBIM1Q969X1 311 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 BOCQ9BWV1 1114 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 R3HDMLQ9H3Y0 253 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 RPL36Q9Y3U8 105 aaKnown RBP17.93■□□□□ 0.46
CLIP2-202ENST00000361545 ZNF217O75362 1048 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 CBLP22681 906 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 PER3P56645 1201 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 C6orf136Q5SQH8 315 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 TMPRSS9Q7Z410 1059 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 UFD1Q92890 307 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 FGF13Q92913 245 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 FOXJ1Q92949 421 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 TCEAL4Q96EI5 215 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 FAM210AQ96ND0 272 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 F2RL3Q96RI0 385 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 POLR2J2Q9GZM3 115 aaKnown RBP17.93■□□□□ 0.46
CLIP2-202ENST00000361545 RHCGQ9UBD6 479 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 PCDHGB7Q9Y5F8 929 aa17.93■□□□□ 0.46
CLIP2-202ENST00000361545 MATN2O00339 956 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 IL3P08700 152 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 EIF1AXP47813 144 aaKnown RBP17.92■□□□□ 0.46
CLIP2-202ENST00000361545 DNAJB13P59910 316 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 HNRNPKP61978 463 aaKnown RBP eCLIP17.92■□□□□ 0.462e-6■■■■■ 27.9
CLIP2-202ENST00000361545 ST3GAL3Q11203 375 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 ZNF630Q2M218 657 aaPredicted RBP17.92■□□□□ 0.46
CLIP2-202ENST00000361545 HSDL2Q6YN16 418 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 ZNF676Q8N7Q3 588 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 PTGES2Q9H7Z7 377 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 TAS2R9Q9NYW1 312 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 CD9P21926 228 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 CBX5P45973 191 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 TXNL4AP83876 142 aaKnown RBP17.92■□□□□ 0.46
CLIP2-202ENST00000361545 FBXO43Q4G163 708 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 B3GNT9Q6UX72 402 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 DIABLOQ9NR28 239 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 CCDC88AQ3V6T2 1871 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 MYH1P12882 1939 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 URB1O60287 2271 aaKnown RBP17.92■□□□□ 0.46
CLIP2-202ENST00000361545 SLC16A5O15375 505 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 CREG1O75629 220 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 TRMUO75648 421 aaKnown RBP17.92■□□□□ 0.46
CLIP2-202ENST00000361545 SLAMF1Q13291 335 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 TECRLQ5HYJ1 363 aa17.92■□□□□ 0.46
CLIP2-202ENST00000361545 CSNK1A1LQ8N752 337 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms