RNA–Protein interactions for RNA: ENST00000358519.8

CNGA1-201, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNGA1, Length 2,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-201ENST00000358519 MVKQ03426 396 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SOX4Q06945 474 aaPredicted RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ADIGQ0VDE8 80 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 HYAL2Q12891 473 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 PPP1R8Q12972 351 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SERINC3Q13530 473 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ELOAQ14241 798 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 GRK1Q15835 563 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SMN1Q16637 294 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 KIF19Q2TAC6 998 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ARHGAP15Q53QZ3 475 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 RAB6CQ53S08 254 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ALFQ53S48 1182 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ZMAT1Q5H9K5 638 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 TSTD2Q5T7W7 516 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SH3PXD2AQ5TCZ1 1133 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 FAM219BQ5XKK7 198 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 NCBP2-AS2Q69YL0 99 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 LAIR1Q6GTX8 287 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 RETSATQ6NUM9 610 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 TMEM184AQ6ZMB5 413 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SCARA5Q6ZMJ2 495 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 LARP4Q71RC2 724 aaKnown RBP eCLIP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 BHLHA9Q7RTU4 235 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 TRMT1LQ7Z2T5 733 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 B3GNT8Q7Z7M8 397 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 GPALPP1Q8IXQ4 340 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 TMEM192Q8IY95 271 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 RDH10Q8IZV5 341 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 DEFB106AQ8N104 65 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ZNF366Q8N895 744 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 COLGALT1Q8NBJ5 622 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 HJURPQ8NCD3 748 aaPredicted RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 WDR48Q8TAF3 677 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 FBLIM1Q8WUP2 373 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 PCNPQ8WW12 178 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 WFDC12Q8WWY7 111 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 UFD1Q92890 307 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 PTP4A1Q93096 173 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 TMEM125Q96AQ2 219 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 REPS1Q96D71 796 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SGTBQ96EQ0 304 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SIPA1Q96FS4 1042 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 TSPAN17Q96FV3 270 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 PDLIM5Q96HC4 596 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 Q96MT0 163 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 FOPNLQ96NB1 174 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 FCRL3Q96P31 734 aaPredicted RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 KCNS3Q9BQ31 491 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ZNF416Q9BWM5 594 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ITPAQ9BY32 194 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 UGT2B28Q9BY64 529 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 PITHD1Q9GZP4 211 aaPredicted RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SLC22A4Q9H015 551 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 RAB6CQ9H0N0 254 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 PPIL3Q9H2H8 161 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 OR51B5Q9H339 312 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 MUC13Q9H3R2 512 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 RNF121Q9H920 327 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 AGO3Q9H9G7 860 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 CASS4Q9NQ75 786 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 PCDHB16Q9NRJ7 776 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ING3Q9NXR8 418 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SLC39A1Q9NY26 324 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 EVLQ9UI08 416 aaPredicted RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 CYTH4Q9UIA0 394 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 CD207Q9UJ71 328 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 C3orf18Q9UK00 162 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SLC39A10Q9ULF5 831 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 COPS3Q9UNS2 423 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 RNF6Q9Y252 685 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 PCDHB14Q9Y5E9 798 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ACTL7AQ9Y615 435 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 STON1Q9Y6Q2 735 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 CHD9Q3L8U1 2897 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 BRWD1Q9NSI6 2320 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 TP53BP1Q12888 1972 aaPredicted RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 F8W036 122 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 M0QYT0 321 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 BCKDKO14874 412 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SLC16A6O15403 523 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 SH3BP5O60239 455 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 HS6ST1O60243 411 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 NBNO60934 754 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 KATNA1O75449 491 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 B3GAT3O94766 335 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ALDOCP09972 364 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 RAP2AP10114 183 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 RRASP10301 218 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 RAB3AP20336 220 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 OGNP20774 298 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 CHMP24386 653 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 GRK5P34947 590 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 TRIM23P36406 574 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ATP5C1P36542 298 aaKnown RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 AVPR1AP37288 418 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 PIK3CBP42338 1070 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 CTSKP43235 329 aa3.85□□□□□ -1.79
CNGA1-201ENST00000358519 GBX2P52951 348 aaPredicted RBP3.85□□□□□ -1.79
CNGA1-201ENST00000358519 ERVK-8P63133 956 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms