RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 HDAC3O15379 428 aa8.79□□□□□ -1
UPF2-202ENST00000357604 B4GALT2O60909 372 aa8.79□□□□□ -1
UPF2-202ENST00000357604 TGFB1P01137 390 aa8.79□□□□□ -1
UPF2-202ENST00000357604 ZNF888P0CJ79 500 aaPredicted RBP8.79□□□□□ -1
UPF2-202ENST00000357604 TDGF1P13385 188 aa8.79□□□□□ -1
UPF2-202ENST00000357604 MASP1P48740 699 aa8.79□□□□□ -1
UPF2-202ENST00000357604 ARF3P61204 181 aaPredicted RBP8.79□□□□□ -1
UPF2-202ENST00000357604 MC2RQ01718 297 aa8.79□□□□□ -1
UPF2-202ENST00000357604 DOC2AQ14183 400 aa8.79□□□□□ -1
UPF2-202ENST00000357604 GPR19Q15760 415 aa8.79□□□□□ -1
UPF2-202ENST00000357604 SCIMPQ6UWF3 145 aa8.79□□□□□ -1
UPF2-202ENST00000357604 FRMD7Q6ZUT3 714 aa8.79□□□□□ -1
UPF2-202ENST00000357604 GPR180Q86V85 440 aa8.79□□□□□ -1
UPF2-202ENST00000357604 SUMF1Q8NBK3 374 aa8.79□□□□□ -1
UPF2-202ENST00000357604 TRAPPC9Q96Q05 1148 aa8.79□□□□□ -1
UPF2-202ENST00000357604 CNPPD1Q9BV87 410 aa8.79□□□□□ -1
UPF2-202ENST00000357604 DDX18Q9NVP1 670 aaKnown RBP8.79□□□□□ -1
UPF2-202ENST00000357604 GTF2E2P29084 291 aaKnown RBP8.79□□□□□ -1
UPF2-202ENST00000357604 CYP51A1Q16850 503 aa8.79□□□□□ -1
UPF2-202ENST00000357604 LIX1Q8N485 282 aa8.79□□□□□ -1
UPF2-202ENST00000357604 METTL27Q8N6F8 245 aaPredicted RBP8.79□□□□□ -1
UPF2-202ENST00000357604 OR56A1Q8NGH5 318 aa8.79□□□□□ -1
UPF2-202ENST00000357604 ZBTB9Q96C00 473 aa8.79□□□□□ -1
UPF2-202ENST00000357604 NAF1Q96HR8 494 aaKnown RBP8.79□□□□□ -1
UPF2-202ENST00000357604 DPH1Q9BZG8 443 aa8.79□□□□□ -1
UPF2-202ENST00000357604 ADAMTS6Q9UKP5 1117 aa8.79□□□□□ -1
UPF2-202ENST00000357604 UTS2RQ9UKP6 389 aa8.79□□□□□ -1
UPF2-202ENST00000357604 ANGPT4Q9Y264 503 aa8.79□□□□□ -1
UPF2-202ENST00000357604 NSG1A0A0A6YYJ2 146 aa8.78□□□□□ -1
UPF2-202ENST00000357604 FOXE1O00358 373 aaPredicted RBP8.78□□□□□ -1
UPF2-202ENST00000357604 KLHL18O94889 574 aa8.78□□□□□ -1
UPF2-202ENST00000357604 FHP07954 510 aa8.78□□□□□ -1
UPF2-202ENST00000357604 GRIA3P42263 894 aa8.78□□□□□ -1
UPF2-202ENST00000357604 LSSP48449 732 aa8.78□□□□□ -1
UPF2-202ENST00000357604 PGDP52209 483 aa8.78□□□□□ -1
UPF2-202ENST00000357604 NCBP2P52298 156 aaKnown RBP eCLIP8.78□□□□□ -15e-9■■■■□ 25.3
UPF2-202ENST00000357604 AQP5P55064 265 aa8.78□□□□□ -1
UPF2-202ENST00000357604 DEFB110Q30KQ9 67 aa8.78□□□□□ -1
UPF2-202ENST00000357604 RNF111Q6ZNA4 994 aa8.78□□□□□ -1
UPF2-202ENST00000357604 KLHDC8AQ8IYD2 350 aa8.78□□□□□ -1
UPF2-202ENST00000357604 PIWIL2Q8TC59 973 aaKnown RBP8.78□□□□□ -1
UPF2-202ENST00000357604 EXOSC8Q96B26 276 aaKnown RBP8.78□□□□□ -1
UPF2-202ENST00000357604 PTERQ96BW5 349 aa8.78□□□□□ -1
UPF2-202ENST00000357604 C7orf26Q96N11 449 aa8.78□□□□□ -1
UPF2-202ENST00000357604 MCM8Q9UJA3 840 aa8.78□□□□□ -1
UPF2-202ENST00000357604 RNF11Q9Y3C5 154 aa8.78□□□□□ -1
UPF2-202ENST00000357604 DUXAA6NLW8 204 aa8.78□□□□□ -1
UPF2-202ENST00000357604 BBIP1A8MTZ0 92 aa8.78□□□□□ -1
UPF2-202ENST00000357604 AKAP10O43572 662 aa8.78□□□□□ -1
UPF2-202ENST00000357604 ALOX5P09917 674 aa8.78□□□□□ -1
UPF2-202ENST00000357604 EPORP19235 508 aa8.78□□□□□ -1
UPF2-202ENST00000357604 NFYCQ13952 458 aa8.78□□□□□ -1
UPF2-202ENST00000357604 PERM1Q5SV97 790 aa8.78□□□□□ -1
UPF2-202ENST00000357604 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.78□□□□□ -15e-6■■■■■ 81.8
UPF2-202ENST00000357604 CACTIN-AS1Q8N1I8 211 aa8.78□□□□□ -1
UPF2-202ENST00000357604 FGF11Q92914 225 aa8.78□□□□□ -1
UPF2-202ENST00000357604 GAL3ST4Q96RP7 486 aa8.78□□□□□ -1
UPF2-202ENST00000357604 ELAC2Q9BQ52 826 aaKnown RBP8.78□□□□□ -1
UPF2-202ENST00000357604 SCHIP1Q9P0W5 487 aaPredicted RBP8.78□□□□□ -1
UPF2-202ENST00000357604 ZNF624Q9P2J8 865 aaPredicted RBP8.78□□□□□ -1
UPF2-202ENST00000357604 SLC23A2Q9UGH3 650 aa8.78□□□□□ -1
UPF2-202ENST00000357604 FARSAQ9Y285 508 aaKnown RBP8.78□□□□□ -1
UPF2-202ENST00000357604 WDR37Q9Y2I8 494 aa8.78□□□□□ -1
UPF2-202ENST00000357604 NR5A2O00482 541 aa8.78□□□□□ -1
UPF2-202ENST00000357604 ABCB1P08183 1280 aaPredicted RBP8.78□□□□□ -1
UPF2-202ENST00000357604 ACADLP28330 430 aa8.78□□□□□ -1
UPF2-202ENST00000357604 IMPA1P29218 277 aa8.78□□□□□ -1
UPF2-202ENST00000357604 RAB8AP61006 207 aa8.78□□□□□ -1
UPF2-202ENST00000357604 CATSPEREQ5SY80 951 aa8.78□□□□□ -1
UPF2-202ENST00000357604 INTS11Q5TA45 600 aaKnown RBP8.78□□□□□ -1
UPF2-202ENST00000357604 KIAA1614Q5VZ46 1190 aa8.78□□□□□ -1
UPF2-202ENST00000357604 DND1Q8IYX4 353 aaKnown RBP8.78□□□□□ -1
UPF2-202ENST00000357604 MAML2Q8IZL2 1156 aaPredicted RBP8.78□□□□□ -1
UPF2-202ENST00000357604 NT5CQ8TCD5 201 aa8.78□□□□□ -1
UPF2-202ENST00000357604 ADAMTS15Q8TE58 950 aa8.78□□□□□ -1
UPF2-202ENST00000357604 ZCCHC14Q8WYQ9 949 aaKnown RBP8.78□□□□□ -1
UPF2-202ENST00000357604 ZNF354BQ96LW1 612 aa8.78□□□□□ -1
UPF2-202ENST00000357604 NTMT1Q9BV86 223 aa8.78□□□□□ -1
UPF2-202ENST00000357604 VCXQ9H320 206 aa8.78□□□□□ -1
UPF2-202ENST00000357604 C3orf18Q9UK00 162 aa8.78□□□□□ -1
UPF2-202ENST00000357604 NDUFAF1Q9Y375 327 aa8.78□□□□□ -1
UPF2-202ENST00000357604 MRPS2Q9Y399 296 aaKnown RBP8.78□□□□□ -1
UPF2-202ENST00000357604 DTNAQ9Y4J8 743 aa8.78□□□□□ -1
UPF2-202ENST00000357604 GTPBP1O00178 669 aaKnown RBP8.78□□□□□ -1
UPF2-202ENST00000357604 KLK1P06870 262 aa8.78□□□□□ -1
UPF2-202ENST00000357604 SLC5A2P31639 672 aa8.78□□□□□ -1
UPF2-202ENST00000357604 RORAP35398 523 aa8.78□□□□□ -1
UPF2-202ENST00000357604 RFX3P48380 749 aa8.78□□□□□ -1
UPF2-202ENST00000357604 CDH13P55290 713 aa8.78□□□□□ -1
UPF2-202ENST00000357604 ERVPABLB-1P60509 514 aa8.78□□□□□ -1
UPF2-202ENST00000357604 OC90Q02509 493 aaPredicted RBP8.78□□□□□ -1
UPF2-202ENST00000357604 ZNF549Q6P9A3 640 aa8.78□□□□□ -1
UPF2-202ENST00000357604 RCBTB1Q8NDN9 531 aa8.78□□□□□ -1
UPF2-202ENST00000357604 RSRC1Q96IZ7 334 aaKnown RBP8.78□□□□□ -1
UPF2-202ENST00000357604 MTERF1Q99551 399 aaKnown RBP8.78□□□□□ -1
UPF2-202ENST00000357604 CTRCQ99895 268 aa8.78□□□□□ -1
UPF2-202ENST00000357604 NUF2Q9BZD4 464 aa8.78□□□□□ -1
UPF2-202ENST00000357604 NAALAD2Q9Y3Q0 740 aa8.78□□□□□ -1
UPF2-202ENST00000357604 NEUROG3Q9Y4Z2 214 aa8.78□□□□□ -1
UPF2-202ENST00000357604 IGHV5-10-1A0A0J9YXX1 117 aa8.77□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms