RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ZFP69BQ9UJL9 534 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 ERRFI1Q9UJM3 462 aaPredicted RBP15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 COPG1Q9Y678 874 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 USP9YO00507 2555 aaPredicted RBP15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 HMX2A2RU54 273 aa15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 FAM227AF5H4B4 570 aa15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 WDPCPO95876 746 aa15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 ALOX12P18054 663 aa15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 GRK3P35626 688 aa15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 MAGEA4P43358 317 aa15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 POU4F1Q01851 419 aa15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 PWP1Q13610 501 aa15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 FHL5Q5TD97 284 aa15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 MAATS1Q7Z4T9 603 aa15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 OR1N1Q8NGS0 311 aa15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 FBF1Q8TES7 1133 aa15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 TM9SF4Q92544 642 aa15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 UBXN10Q96LJ8 280 aa15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 LMF1Q96S06 567 aa15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 CPNE1Q99829 537 aa15.75■□□□□ 0.11
PDLIM7-201ENST00000355572 TGFBR3LH3BV60 316 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 AGFG2O95081 481 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 HNRNPH1P31943 449 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 GP5P40197 560 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 HSPA7P48741 367 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 TNFSF10P50591 281 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 IRF9Q00978 393 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 CDC16Q13042 620 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 SLBPQ14493 270 aaKnown RBP eCLIP15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 RBBP5Q15291 538 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 SFT2D3Q587I9 215 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 TOR1AIP1Q5JTV8 583 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 IRAK1BP1Q5VVH5 260 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 ADAMTSL2Q86TH1 951 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 CTAGE3PQ8IX95 158 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 PPM1NQ8N819 430 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 TMEM52Q8NDY8 209 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 C16orf45Q96MC5 204 aaPredicted RBP15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 TUBB6Q9BUF5 446 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 NSMCE4AQ9NXX6 385 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 DYRK1BQ9Y463 629 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 CLDN16Q9Y5I7 305 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 PRRC2CQ9Y520 2896 aaKnown RBP15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 EML6Q6ZMW3 1958 aa15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 RP1L1Q8IWN7 2480 aaPredicted RBP15.74■□□□□ 0.11
PDLIM7-201ENST00000355572 KLHL41O60662 606 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 SLC35E2BP0CK96 405 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 C1GALT1C1LP0DN25 315 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 AHRP35869 848 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 HNRNPFP52597 415 aaKnown RBP15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 BMPR2Q13873 1038 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 RUNX2Q13950 521 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 ABRAXAS2Q15018 415 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 BTBD16Q32M84 506 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 ZNF324BQ6AW86 544 aaPredicted RBP15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 PAPD4Q6PIY7 484 aaKnown RBP15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 RIPOR1Q6ZS17 1223 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 FRA10AC1Q70Z53 315 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 CYS1Q717R9 158 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 CA13Q8N1Q1 262 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 KIF2BQ8N4N8 673 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 PLPP5Q8NEB5 264 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 EXT2Q93063 718 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 HES7Q9BYE0 225 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 NECTIN3Q9NQS3 549 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 IGSF5Q9NSI5 407 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 ZNF490Q9ULM2 529 aaPredicted RBP15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 UTP11Q9Y3A2 253 aaKnown RBP15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 KCNE2Q9Y6J6 123 aa15.73■□□□□ 0.11
PDLIM7-201ENST00000355572 POLEQ07864 2286 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 A1L4Q6 167 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 PABPN1LA6NDY0 278 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 ANKUB1A6NFN9 424 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 B4GALT2O60909 372 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 WFS1O76024 890 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 FHP07954 510 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 STMN1P16949 149 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 MAOAP21397 527 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 AGTR2P50052 363 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 TDGF1P3P51864 188 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 RAB10P61026 200 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 ARG2P78540 354 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 PMP22Q01453 160 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 HERC3Q15034 1050 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 TLR1Q15399 786 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 PLAG1Q6DJT9 500 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 H3F3CQ6NXT2 135 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 CRLF3Q8IUI8 442 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 BEST3Q8N1M1 668 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 NOA1Q8NC60 698 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 FAR1Q8WVX9 515 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 METTL21AQ8WXB1 218 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 HAS2Q92819 552 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 TBC1D20Q96BZ9 403 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 MRRFQ96E11 262 aaKnown RBP15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 VPS50Q96JG6 964 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 MAGEB10Q96LZ2 347 aaPredicted RBP15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 QRFPRQ96P65 431 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 AIF1LQ9BQI0 150 aa15.72■□□□□ 0.11
PDLIM7-201ENST00000355572 SLC29A3Q9BZD2 475 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms