RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 GKN3PP0CG01 181 aa14.43□□□□□ -0.1
LMX1B-201ENST00000355497 FXYD6P3P58550 94 aa14.43□□□□□ -0.1
LMX1B-201ENST00000355497 RPS3AP61247 264 aaKnown RBP14.43□□□□□ -0.1
LMX1B-201ENST00000355497 UBXN2BQ14CS0 331 aa14.43□□□□□ -0.1
LMX1B-201ENST00000355497 TMEM164Q5U3C3 297 aa14.43□□□□□ -0.1
LMX1B-201ENST00000355497 TMPRSS9Q7Z410 1059 aa14.43□□□□□ -0.1
LMX1B-201ENST00000355497 TSTD1Q8NFU3 115 aa14.43□□□□□ -0.1
LMX1B-201ENST00000355497 PFDN5Q99471 154 aa14.43□□□□□ -0.1
LMX1B-201ENST00000355497 ERVK-18Q9QC07 812 aa14.43□□□□□ -0.1
LMX1B-201ENST00000355497 TRAV6A0A075B6T7 132 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 GRXCR1A8MXD5 290 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 VILLO15195 856 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 AHSA1O95433 338 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 UNGP13051 313 aaPredicted RBP14.42□□□□□ -0.1
LMX1B-201ENST00000355497 ZNF14P17017 642 aaPredicted RBP14.42□□□□□ -0.1
LMX1B-201ENST00000355497 ABRAXAS2Q15018 415 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 HERC2P3Q9BVR0 1158 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 RIPK3Q9Y572 518 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 FAM159BA6NKW6 160 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 TMEM233B4DJY2 109 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 TRAPPC6AO75865 159 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 CLRN1P58418 232 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 HNRNPA0Q13151 305 aaKnown RBP14.42□□□□□ -0.1
LMX1B-201ENST00000355497 EPGNQ6UW88 154 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 LYSMD3Q7Z3D4 306 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 SMPDL3AQ92484 453 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 UBQLN2Q9UHD9 624 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 MGAT4BQ9UQ53 548 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 A0A1W2PPL8 197 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 CPED1A4D0V7 1026 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 CCNOP22674 350 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 GNRHRP30968 328 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 FNTBP49356 437 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 CLCNKAP51800 687 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 DGKEP52429 567 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 HYAL2Q12891 473 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 CHRFAM7AQ494W8 412 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 C1orf94Q6P1W5 598 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 DCDC5Q6ZRR9 648 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 PDSS2Q86YH6 399 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 TMEM156Q8N614 296 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 C7orf57Q8NEG2 295 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 SCAMP5Q8TAC9 235 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 CDKN2AIPNLQ96HQ2 116 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 C1orf21Q9H246 121 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 DNAJC27Q9NZQ0 273 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 STATHP02808 62 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 RPS2P15880 293 aaKnown RBP14.42□□□□□ -0.1
LMX1B-201ENST00000355497 ATXN7L3Q14CW9 347 aaPredicted RBP14.42□□□□□ -0.1
LMX1B-201ENST00000355497 ARHGAP40Q5TG30 622 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 BRAT1Q6PJG6 821 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 ZDHHC24Q6UX98 284 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 NPAS3Q8IXF0 933 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 ZNF649Q9BS31 505 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 ZNF717Q9BY31 904 aaPredicted RBP14.42□□□□□ -0.1
LMX1B-201ENST00000355497 ACTL8Q9H568 366 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 RPF2Q9H7B2 306 aaKnown RBP14.42□□□□□ -0.1
LMX1B-201ENST00000355497 TTC24A2A3L6 582 aaPredicted RBP14.42□□□□□ -0.1
LMX1B-201ENST00000355497 WTIPA6NIX2 430 aaPredicted RBP14.42□□□□□ -0.1
LMX1B-201ENST00000355497 LOC730098B7Z3J9 87 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 GABBR2O75899 941 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 IL3P08700 152 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 SLURP2P0DP57 97 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 DNAJB1P25685 340 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 TPGS2Q68CL5 300 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 POC1BQ8TC44 478 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 HSPBAP1Q96EW2 488 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 LDAHQ9H6V9 325 aa14.42□□□□□ -0.1
LMX1B-201ENST00000355497 RNF13O43567 381 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 SMPD1P17405 629 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 WDR4P57081 412 aaKnown RBP14.41□□□□□ -0.1
LMX1B-201ENST00000355497 RIPPLY1Q0D2K3 151 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 GLT8D1Q68CQ7 371 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 MBLAC2Q68D91 279 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 AVL9Q8NBF6 648 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 SLC22A8Q8TCC7 542 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 ASB3Q9Y575 518 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 MTX2O75431 263 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 IL33O95760 270 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 LRIF1Q5T3J3 769 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 LRRN1Q6UXK5 716 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 OR5M3Q8NGP4 307 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 FBXL20Q96IG2 436 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 BEX2Q9BXY8 128 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 BRF2Q9HAW0 419 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 BEX1Q9HBH7 125 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 SLC39A1Q9NY26 324 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 EDARQ9UNE0 448 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 TCRBV7S3A2A0A539 114 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 C6orf47O95873 294 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 ZNF81P51508 661 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 ABHD18Q0P651 414 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 GNMTQ14749 295 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 INAVAQ3KP66 663 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 HSD17B12Q53GQ0 312 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 CYBRD1Q53TN4 286 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 PHF19Q5T6S3 580 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 GDF6Q6KF10 455 aaPredicted RBP14.41□□□□□ -0.1
LMX1B-201ENST00000355497 ZNF367Q7RTV3 350 aa14.41□□□□□ -0.1
LMX1B-201ENST00000355497 HMGB4Q8WW32 186 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms