RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 TGFB1P01137 390 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 ZNF8P17098 575 aaPredicted RBP17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 GGT2P36268 569 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 EIF2DP41214 584 aaKnown RBP17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 SPIBQ01892 262 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 FADDQ13158 208 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 TMPRSS11BQ86T26 416 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 CHTF18Q8WVB6 975 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 ABHD8Q96I13 439 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 CENPOQ9BU64 300 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 GABARAPL3Q9BY60 117 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 ROGDIQ9GZN7 287 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 LINC00597Q9H2U6 94 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 OR51B5Q9H339 312 aa17.39■□□□□ 0.37
PTP4A3-202ENST00000349124 UNC80Q8N2C7 3258 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 SERTM1A2A2V5 107 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 SLC16A5O15375 505 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 SPNP16150 400 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 GRK3P35626 688 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 SP140Q13342 867 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 GANABQ14697 944 aaKnown RBP17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 MPEG1Q2M385 716 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 ZNF404Q494X3 552 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 AGAP7PQ5VUJ5 663 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 GDPD4Q6W3E5 623 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 CPA6Q8N4T0 437 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 C11orf65Q8NCR3 313 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 POP5Q969H6 163 aaKnown RBP17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 Q96MT0 163 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 PCDHGA2Q9Y5H1 932 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 MICAL3Q7RTP6 2002 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 MYO7AQ13402 2215 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 CLCA1A8K7I4 914 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 FAM227AF5H4B4 570 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 H0YIV9 168 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 NPC1O15118 1278 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 CNOT3O75175 753 aaKnown RBP17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 WEE1P30291 646 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 ARSIQ5FYB1 569 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 MPP7Q5T2T1 576 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 STEAP3Q658P3 488 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 TMEM215Q68D42 235 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 ARMCX6Q7L4S7 300 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 LYSMD2Q8IV50 215 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 RAVER1Q8IY67 606 aaKnown RBP17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 SLC39A11Q8N1S5 342 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 WDR48Q8TAF3 677 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 CHCHD6Q9BRQ6 235 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 PADI2Q9Y2J8 665 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 PCDHGA4Q9Y5G9 962 aa17.38■□□□□ 0.37
PTP4A3-202ENST00000349124 PSIP1O75475 530 aaKnown RBP17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 LEFTY1O75610 366 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 URODP06132 367 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 CTSKP43235 329 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 ST3GAL4Q11206 333 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 GRHL2Q6ISB3 625 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 UTS2BQ765I0 119 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 LGI4Q8N135 537 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 CLIP4Q8N3C7 705 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 CPXM2Q8N436 756 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 VPS37AQ8NEZ2 397 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 ZNF675Q8TD23 568 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 COQ8BQ96D53 544 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 NRTNQ99748 197 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 PSD2Q9BQI7 771 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 CDADC1Q9BWV3 514 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 HCFC1R1Q9NWW0 138 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 SPASTQ9UBP0 616 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 BTNL2Q9UIR0 455 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 METTL15A6NJ78 407 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 CDK1P06493 297 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 GSTM1P09488 218 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 CTSAP10619 480 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 CCR2P41597 374 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 HNRNPFP52597 415 aaKnown RBP17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 ELP6Q0PNE2 266 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 SYTL3Q4VX76 610 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 RASGRP3Q8IV61 690 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 C2orf73Q8N5S3 287 aaPredicted RBP17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 SLC35A5Q9BS91 424 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 CCM2Q9BSQ5 444 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 CPEB1Q9BZB8 566 aaKnown RBP17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 ITM2BQ9Y287 266 aa17.37■□□□□ 0.37
PTP4A3-202ENST00000349124 PRAMEF33A0A0G2JMD5 474 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 PITPNM1O00562 1244 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 TGM5O43548 720 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 PRAMEF10O60809 474 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 PCGF2P35227 344 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 TPTEP56180 551 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 SELENBP1Q13228 472 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 CACTIN-AS1Q8N1I8 211 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 POC5Q8NA72 575 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 ZNF740Q8NDX6 193 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 OR4C15Q8NGM1 316 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 TMEM159Q96B96 161 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 OR5M11Q96RB7 305 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 CORO1BQ9BR76 489 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 SORBS1Q9BX66 1292 aaKnown RBP17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 SPNS1Q9H2V7 528 aa17.36■□□□□ 0.37
PTP4A3-202ENST00000349124 MS4A12Q9NXJ0 267 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms