RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 MTERF3Q96E29 417 aa17.83■□□□□ 0.45
PTN-201ENST00000348225 PPM1MQ96MI6 270 aa17.83■□□□□ 0.45
PTN-201ENST00000348225 SH3GL1Q99961 368 aa17.83■□□□□ 0.45
PTN-201ENST00000348225 DUSP26Q9BV47 211 aa17.83■□□□□ 0.45
PTN-201ENST00000348225 ATAD3AQ9NVI7 634 aa17.83■□□□□ 0.45
PTN-201ENST00000348225 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.83■□□□□ 0.45
PTN-201ENST00000348225 ATP6V1HQ9UI12 483 aa17.83■□□□□ 0.45
PTN-201ENST00000348225 AP3M1Q9Y2T2 418 aa17.83■□□□□ 0.45
PTN-201ENST00000348225 KLK4Q9Y5K2 254 aa17.83■□□□□ 0.45
PTN-201ENST00000348225 A0A0J9YY10 115 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 A0A1B0GVT2 93 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 LRIT2A6NDA9 550 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 TMEM221A6NGB7 291 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 M0R296 226 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 BCAS2O75934 225 aaPredicted RBP17.83■□□□□ 0.44
PTN-201ENST00000348225 KRT36O76013 467 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 GBAP04062 536 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 DDX5P17844 614 aaKnown RBP17.83■□□□□ 0.44
PTN-201ENST00000348225 MAGP20916 626 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 TPP2P29144 1249 aaPredicted RBP17.83■□□□□ 0.44
PTN-201ENST00000348225 BSGP35613 385 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 TAS2R50P59544 299 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 STXBP1P61764 594 aaKnown RBP17.83■□□□□ 0.44
PTN-201ENST00000348225 PHC1P78364 1004 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 CYP4F3Q08477 520 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 BNIP2Q12982 314 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 ANXA8L1Q5VT79 327 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 FIGLAQ6QHK4 219 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 FAM156AQ8NDB6 213 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 SRFBP1Q8NEF9 429 aaKnown RBP17.83■□□□□ 0.44
PTN-201ENST00000348225 THAP11Q96EK4 314 aa17.83■□□□□ 0.44
PTN-201ENST00000348225 ZNF717Q9BY31 904 aaPredicted RBP17.83■□□□□ 0.44
PTN-201ENST00000348225 LILRA5A6NI73 299 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 H0Y3Z8 333 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 RFXANKO14593 260 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 ACOT8O14734 319 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 NOBOXO60393 691 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 SDC3O75056 442 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 ANP32DO95626 131 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 TRPC1P48995 793 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 MAPK12P53778 367 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 AP2B1P63010 937 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 RELAQ04206 551 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 TGM3Q08188 693 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 C2orf80Q0P641 193 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 SIM2Q14190 667 aaPredicted RBP17.82■□□□□ 0.44
PTN-201ENST00000348225 RCN1Q15293 331 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 DUOXA1Q1HG43 343 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 DEFB133Q30KQ1 61 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 ADPRMQ3LIE5 342 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 RABL3Q5HYI8 236 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 LRIF1Q5T3J3 769 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 FAM71E1Q6IPT2 247 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 PACS2Q86VP3 889 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 C17orf82Q86X59 251 aaPredicted RBP17.82■□□□□ 0.44
PTN-201ENST00000348225 ZNF761Q86XN6 746 aaPredicted RBP17.82■□□□□ 0.44
PTN-201ENST00000348225 SLC26A7Q8TE54 656 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 COQ8BQ96D53 544 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 ANKRD27Q96NW4 1050 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 SORBS1Q9BX66 1292 aaKnown RBP17.82■□□□□ 0.44
PTN-201ENST00000348225 BHLHE41Q9C0J9 482 aaPredicted RBP17.82■□□□□ 0.44
PTN-201ENST00000348225 MUC13Q9H3R2 512 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 ALG2Q9H553 416 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 SERHLQ9NQF3 203 aa17.82■□□□□ 0.44
PTN-201ENST00000348225 GABRR3A8MPY1 467 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 RTCAO00442 366 aaKnown RBP17.81■□□□□ 0.44
PTN-201ENST00000348225 DFNA5O60443 496 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 PIM1P11309 404 aaPredicted RBP17.81■□□□□ 0.44
PTN-201ENST00000348225 HOXB3P14651 431 aaPredicted RBP17.81■□□□□ 0.44
PTN-201ENST00000348225 MSX2P35548 267 aaPredicted RBP17.81■□□□□ 0.44
PTN-201ENST00000348225 CTSKP43235 329 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 SSR2P43308 183 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 TRA2BP62995 288 aaKnown RBP17.81■□□□□ 0.44
PTN-201ENST00000348225 MS4A2Q01362 244 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 RGS1Q08116 209 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 PDE7AQ13946 482 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 TOR1AIP1Q5JTV8 583 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 OR4C11Q6IEV9 310 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 TRIM40Q6P9F5 258 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 OGFOD3Q6PK18 319 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 DNAJC14Q6Y2X3 702 aaPredicted RBP17.81■□□□□ 0.44
PTN-201ENST00000348225 ASPGQ86U10 573 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 ANKRD46Q86W74 232 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 HIPK4Q8NE63 616 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 BHLHE22Q8NFJ8 381 aaPredicted RBP17.81■□□□□ 0.44
PTN-201ENST00000348225 PPCDCQ96CD2 204 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 GBP5Q96PP8 586 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 KCNC2Q96PR1 638 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 SLC38A3Q99624 504 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 TRIM15Q9C019 465 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 PAIP1Q9H074 479 aaKnown RBP17.81■□□□□ 0.44
PTN-201ENST00000348225 DDX31Q9H8H2 851 aaKnown RBP17.81■□□□□ 0.44
PTN-201ENST00000348225 VAPAQ9P0L0 249 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 SH3BP4Q9P0V3 963 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 CSNK1G3Q9Y6M4 447 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 TECTAO75443 2155 aa17.81■□□□□ 0.44
PTN-201ENST00000348225 TNRC6BQ9UPQ9 1833 aaKnown RBP17.8■□□□□ 0.44
PTN-201ENST00000348225 PRSS51A0A1B0GVH4 220 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 PPM1DO15297 605 aa17.8■□□□□ 0.44
PTN-201ENST00000348225 UBXN7O94888 489 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms