RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 LGALS12Q96DT0 336 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 REXO5Q96IC2 774 aaKnown RBP20.5■□□□□ 0.87
PTPN18-202ENST00000347849 OR4K3Q96R72 315 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 MAGIXQ9H6Y5 334 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 KAT7O95251 611 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 B3GALT4O96024 378 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 ITGAMP11215 1152 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 BCKDHAP12694 445 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 GPR1P46091 355 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 TPTEP56180 551 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 AP1S2P56377 157 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 CHIT1Q13231 466 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 ERN2Q76MJ5 926 aaKnown RBP20.5■□□□□ 0.87
PTPN18-202ENST00000347849 CYP2U1Q7Z449 544 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 TRAPPC5Q8IUR0 188 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 ZDHHC21Q8IVQ6 265 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 CFAP206Q8IYR0 622 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 SLC7A5P1Q8MH63 180 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 PHF10Q8WUB8 498 aaKnown RBP20.5■□□□□ 0.87
PTPN18-202ENST00000347849 SLC29A3Q9BZD2 475 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 ELOVL6Q9H5J4 265 aa20.5■□□□□ 0.87
PTPN18-202ENST00000347849 DNAH14Q0VDD8 3507 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 MYO1GB0I1T2 1018 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 E7EQ34 232 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 KRT6AP02538 564 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 KRT6BP04259 564 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 KRT6CP48668 564 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 DAPP51397 102 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 SLC13A2Q13183 592 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 SELENBP1Q13228 472 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 NAE1Q13564 534 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 USP39Q53GS9 565 aaKnown RBP20.49■□□□□ 0.87
PTPN18-202ENST00000347849 CACHD1Q5VU97 1274 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 CEP68Q76N32 757 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 L3MBTL4Q8NA19 623 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 MED8Q96G25 268 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 APIPQ96GX9 242 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 DACH2Q96NX9 599 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 PKP4Q99569 1192 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 BTBD2Q9BX70 525 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 C1orf109Q9NX04 203 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 STOX2Q9P2F5 926 aaPredicted RBP20.49■□□□□ 0.87
PTPN18-202ENST00000347849 POU2F3Q9UKI9 436 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 KIF26AQ9ULI4 1882 aaPredicted RBP20.49■□□□□ 0.87
PTPN18-202ENST00000347849 PABPN1LA6NDY0 278 aaKnown RBP20.49■□□□□ 0.87
PTPN18-202ENST00000347849 JUNDP17535 347 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 ELP6Q0PNE2 266 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 SHQ1Q6PI26 577 aaKnown RBP20.49■□□□□ 0.87
PTPN18-202ENST00000347849 AGTRAPQ6RW13 159 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 ANKRD46Q86W74 232 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 STARD8Q92502 1023 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 MYOCQ99972 504 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 SLIRPQ9GZT3 109 aaKnown RBP20.49■□□□□ 0.87
PTPN18-202ENST00000347849 RMND5AQ9H871 391 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 ABCB10Q9NRK6 738 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 THAP10Q9P2Z0 257 aaPredicted RBP20.49■□□□□ 0.87
PTPN18-202ENST00000347849 TMEM98Q9Y2Y6 226 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 GMPPBQ9Y5P6 360 aa20.49■□□□□ 0.87
PTPN18-202ENST00000347849 A8MU76 341 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 ZNF682O95780 498 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 PHC1P78364 1004 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 ATG9BQ674R7 924 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 RNF165Q6ZSG1 346 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 THOC6Q86W42 341 aaKnown RBP20.48■□□□□ 0.87
PTPN18-202ENST00000347849 PLD3Q8IV08 490 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 GLB1L3Q8NCI6 653 aaPredicted RBP20.48■□□□□ 0.87
PTPN18-202ENST00000347849 RHOXF1Q8NHV9 184 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 UBE2FQ969M7 185 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 EGLN2Q96KS0 407 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 DSN1Q9H410 356 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 CLMPQ9H6B4 373 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 RASSF1Q9NS23 344 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 OBP2AQ9NY56 170 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 DIRAS1O95057 198 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 IMPA1P29218 277 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 MAD2L1Q13257 205 aaPredicted RBP20.48■□□□□ 0.87
PTPN18-202ENST00000347849 SF1Q15637 639 aaKnown RBP20.48■□□□□ 0.87
PTPN18-202ENST00000347849 CHCHD4Q8N4Q1 142 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 HTRA1Q92743 480 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 ACOT13Q9NPJ3 140 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 ABCG2Q9UNQ0 655 aa20.48■□□□□ 0.87
PTPN18-202ENST00000347849 ZNF8P17098 575 aaPredicted RBP20.47■□□□□ 0.87
PTPN18-202ENST00000347849 EPHA2P29317 976 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 DRD3P35462 400 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 GRK3P35626 688 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 PPP5CP53041 499 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 DLX2Q07687 328 aaPredicted RBP20.47■□□□□ 0.87
PTPN18-202ENST00000347849 GGTA1PQ4G0N0 100 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 CPA6Q8N4T0 437 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 INPP5KQ9BT40 448 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 DYRK4Q9NR20 520 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 SERGEFQ9UGK8 458 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 FAM220BPB1ANY3 271 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 RGS10O43665 173 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 FAM20BO75063 409 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 CD36P16671 472 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 CD40LGP29965 261 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 SERPINB1P30740 379 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 GDI1P31150 447 aa20.47■□□□□ 0.87
PTPN18-202ENST00000347849 GZMMP51124 257 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms