RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 FOXM1Q08050 763 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 ZNF763Q0D2J5 394 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 PWP1Q13610 501 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 MAPKAPK3Q16644 382 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 DPY19L1Q2PZI1 675 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 TRMT5Q32P41 509 aaKnown RBP10.48□□□□□ -0.73
ECM1-201ENST00000346569 C6orf132Q5T0Z8 1188 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 PRR23BQ6ZRT6 265 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 MSANTD1Q6ZTZ1 278 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 NET1Q7Z628 596 aaPredicted RBP10.48□□□□□ -0.73
ECM1-201ENST00000346569 OOSP2Q86WS3 158 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 C10orf67Q8IYJ2 551 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 OR7A2PQ8NGA2 310 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 BAHD1Q8TBE0 780 aaPredicted RBP10.48□□□□□ -0.73
ECM1-201ENST00000346569 NT5CQ8TCD5 201 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 SLC13A3Q8WWT9 602 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 PIGKQ92643 395 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 TM4SF18Q96CE8 201 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 MS4A6EQ96DS6 147 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 SMIM10Q96HG1 83 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 OR52E6Q96RD3 313 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 SORBS1Q9BX66 1292 aaKnown RBP10.48□□□□□ -0.73
ECM1-201ENST00000346569 SLC6A16Q9GZN6 736 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 RAB33BQ9H082 229 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 DDX31Q9H8H2 851 aaKnown RBP10.48□□□□□ -0.73
ECM1-201ENST00000346569 MYNNQ9NPC7 610 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 SERHLQ9NQF3 203 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 PRDM7Q9NQW5 492 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 ZSCAN32Q9NX65 697 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 CMTM6Q9NX76 183 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 EPHA6Q9UF33 1036 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 PACSIN3Q9UKS6 424 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 POMT2Q9UKY4 750 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 ERVK-11Q9UQG0 969 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 POMPQ9Y244 141 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 CACNA1EQ15878 2313 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 WDR87Q6ZQQ6 2873 aa10.48□□□□□ -0.73
ECM1-201ENST00000346569 CACNA1HO95180 2353 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 TNRC6BQ9UPQ9 1833 aaKnown RBP10.47□□□□□ -0.73
ECM1-201ENST00000346569 CABIN1Q9Y6J0 2220 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 TRBV5-3A0A0A0MS03 114 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 GNG14A0A1W2PPG7 69 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 TRIM38O00635 465 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 SCAMP2O15127 329 aaKnown RBP10.47□□□□□ -0.73
ECM1-201ENST00000346569 CAPN5O15484 640 aaPredicted RBP10.47□□□□□ -0.73
ECM1-201ENST00000346569 NDUFS4O43181 175 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 ZW10O43264 779 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 AKAP10O43572 662 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 TBX19O60806 448 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 PRAMEF10O60809 474 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 PDE5AO76074 875 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 GBAP04062 536 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 PROS1P07225 676 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 PIM1P11309 404 aaPredicted RBP10.47□□□□□ -0.73
ECM1-201ENST00000346569 HOXB9P17482 250 aaPredicted RBP10.47□□□□□ -0.73
ECM1-201ENST00000346569 ME2P23368 584 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 PTPN6P29350 595 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 ACTR3P61158 418 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 PPP1CAP62136 330 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 MS4A2Q01362 244 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 PDE7AQ13946 482 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 NFYCQ13952 458 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 KPNB1Q14974 876 aaKnown RBP10.47□□□□□ -0.73
ECM1-201ENST00000346569 DUOXA1Q1HG43 343 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 HKDC1Q2TB90 917 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 LRIF1Q5T3J3 769 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 FBXW10Q5XX13 1052 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 OR4C11Q6IEV9 310 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 OR4F3Q6IEY1 312 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 MRM1Q6IN84 353 aaKnown RBP10.47□□□□□ -0.73
ECM1-201ENST00000346569 NANOGP8Q6NSW7 305 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 PRMT9Q6P2P2 845 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 ABHD17CQ6PCB6 329 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 KLHL35Q6PF15 583 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 PAGE2Q7Z2X7 111 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 GPR180Q86V85 440 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 KIAA2013Q8IYS2 634 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 AMER3Q8N944 861 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 DNAJB8Q8NHS0 232 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 STARD8Q92502 1023 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 GFM2Q969S9 779 aaKnown RBP10.47□□□□□ -0.73
ECM1-201ENST00000346569 TMEM125Q96AQ2 219 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 MTERF3Q96E29 417 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 QRFPRQ96P65 431 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 FCRL4Q96PJ5 515 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 TRAPPC9Q96Q05 1148 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 TEFMQ96QE5 360 aaKnown RBP10.47□□□□□ -0.73
ECM1-201ENST00000346569 SLC38A3Q99624 504 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 CGREF1Q99674 301 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 MACROD1Q9BQ69 325 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 SLC39A3Q9BRY0 314 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 REXO4Q9GZR2 422 aaKnown RBP10.47□□□□□ -0.73
ECM1-201ENST00000346569 PAIP1Q9H074 479 aaKnown RBP10.47□□□□□ -0.73
ECM1-201ENST00000346569 REEP4Q9H6H4 257 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 NANOGQ9H9S0 305 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 IL1RL2Q9HB29 575 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 CAPN10Q9HC96 672 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 PRDM4Q9UKN5 801 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 NEUROG3Q9Y4Z2 214 aa10.47□□□□□ -0.73
ECM1-201ENST00000346569 GOLGA4Q13439 2230 aaKnown RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms