RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 DRD4P21917 467 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 PIK3CGP48736 1102 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 IL10RAQ13651 578 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 RHBDD2Q6NTF9 364 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 GPRIN3Q6ZVF9 776 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 EXD3Q8N9H8 876 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 LSM14AQ8ND56 463 aaKnown RBP13.15□□□□□ -0.3
TPM4-202ENST00000344824 PROKR1Q8TCW9 393 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 AGAP11Q8TF27 550 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 ZUFSPQ96AP4 578 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 WBP1Q96G27 269 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 C7orf26Q96N11 449 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 KCNA7Q96RP8 456 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 ZFYVE21Q9BQ24 234 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 TRMOQ9BU70 441 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 SGPP1Q9BX95 441 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 GPR87Q9BY21 358 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 NSRP1Q9H0G5 558 aaKnown RBP13.15□□□□□ -0.3
TPM4-202ENST00000344824 EPN3Q9H201 632 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 NPHS2Q9NP85 383 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 IFT80Q9P2H3 777 aaPredicted RBP13.15□□□□□ -0.3
TPM4-202ENST00000344824 SH2B3Q9UQQ2 575 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 RAP2CQ9Y3L5 183 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 PCDHGA6Q9Y5G7 932 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 CFAP46Q8IYW2 2715 aa13.15□□□□□ -0.3
TPM4-202ENST00000344824 H3BMH7 237 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 OTCP00480 354 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 EPORP19235 508 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 CCND1P24385 295 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 NAA20P61599 178 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 NFATC3Q12968 1075 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 GRM7Q14831 915 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 NCF4Q15080 339 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 TCTE1Q5JU00 501 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 WASHC2DQ5SRD0 308 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 CLEC6AQ6EIG7 209 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 LETMD1Q6P1Q0 360 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 METTL2BQ6P1Q9 378 aaKnown RBP13.14□□□□□ -0.31
TPM4-202ENST00000344824 RNF44Q7L0R7 432 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 MILR1Q7Z6M3 343 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 TMPRSS11BQ86T26 416 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 PLD3Q8IV08 490 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 KLHDC8AQ8IYD2 350 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 OR4F6Q8NGB9 312 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 GBP5Q96PP8 586 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 ZNF382Q96SR6 550 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 ACTR8Q9H981 624 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 PRM3Q9NNZ6 103 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 CUTCQ9NTM9 273 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 PADI2Q9Y2J8 665 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 SCN2AQ99250 2005 aa13.14□□□□□ -0.31
TPM4-202ENST00000344824 LOC105369274A0A096LPK9 316 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 LOC102723532A0A0G2JNH3 316 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 A0A1B0GX78 115 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 OR2A25A4D2G3 310 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 ARGFXA6NJG6 315 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 HAT1O14929 419 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 SKAP2O75563 359 aaPredicted RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 C1QL1O75973 258 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 STATHP02808 62 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 CDH1P12830 882 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 NPPBP16860 134 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 SERPINB3P29508 390 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 OTX2P32243 289 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 FOLR3P41439 243 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 RPL14P50914 215 aaKnown RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 ARSFP54793 590 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 FOXA1P55317 472 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 DCDP81605 110 aaKnown RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 IRF8Q02556 426 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 CHAF1BQ13112 559 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 TRAF3Q13114 568 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 CHIT1Q13231 466 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 PDCD2Q16342 344 aaPredicted RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 XKR6Q5GH73 641 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 ZNF385CQ66K41 422 aaPredicted RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 CGB2Q6NT52 195 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 LCTLQ6UWM7 567 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 PAQR7Q86WK9 346 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 OR4N4Q8N0Y3 316 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 CDYL2Q8N8U2 506 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 APOBEC4Q8WW27 367 aaKnown RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 NEIL2Q969S2 332 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 PPP1R36Q96LQ0 422 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 ELAC2Q9BQ52 826 aaKnown RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 DPH2Q9BQC3 489 aaPredicted RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 PLCD4Q9BRC7 762 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 HAUS8Q9BT25 410 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 NLNQ9BYT8 704 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 ANKMY1Q9P2S6 941 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 ZNF225Q9UK10 706 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 TCFL5Q9UL49 500 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 STK38LQ9Y2H1 464 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 RNF11Q9Y3C5 154 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 PTRH2Q9Y3E5 179 aaKnown RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 TIMM22Q9Y584 194 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 KCNE2Q9Y6J6 123 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 FASNP49327 2511 aaKnown RBP13.13□□□□□ -0.31
TPM4-202ENST00000344824 ZNF462Q96JM2 2506 aa13.13□□□□□ -0.31
TPM4-202ENST00000344824 IGKV1-8A0A0C4DH67 115 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms