RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 A0A088AWK7 358 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 TRAV17A0A0B4J275 112 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 SYNDIG1LA6NDD5 238 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 JRKO75564 520 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 STK16O75716 305 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 CBX6O95503 412 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 STATHP02808 62 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 FHP07954 510 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 ZNF10P21506 573 aaPredicted RBP18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 GLRBP48167 497 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 SNRPNP63162 240 aaKnown RBP18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 NSDHLQ15738 373 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 DEFB134Q4QY38 66 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 MFSD4BQ5TF39 518 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 FAAH2Q6GMR7 532 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 H3F3CQ6NXT2 135 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 ANKRD37Q7Z713 158 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 PPM1NQ8N819 430 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 M1APQ8TC57 530 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 FBF1Q8TES7 1133 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 CREB3L4Q8TEY5 395 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 MOCOSQ96EN8 888 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 WDR34Q96EX3 536 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 CAB39LQ9H9S4 337 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 LANCL2Q9NS86 450 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 ZDHHC18Q9NUE0 388 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 DNAJC11Q9NVH1 559 aa18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 PTBP2Q9UKA9 531 aaKnown RBP18.89■□□□□ 0.61
CEACAM3-201ENST00000344550 USP9YO00507 2555 aaPredicted RBP18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 KIF2AO00139 706 aaPredicted RBP18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 PHGDHO43175 533 aaKnown RBP18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 CLEC3AO75596 197 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 PIAS1O75925 651 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 SERPIND1P05546 499 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 PHBP35232 272 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 TNFSF10P50591 281 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 EFNA3P52797 238 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 ARG2P78540 354 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 RHAGQ02094 409 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 SRSF1Q07955 248 aaKnown RBP eCLIP18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 PCDH1Q08174 1060 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 LAPTM5Q13571 262 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 RBBP5Q15291 538 aaKnown RBP18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 TBCCQ15814 346 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 PRR30Q53SZ7 412 aaPredicted RBP18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 ABHD17BQ5VST6 288 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 QSOX2Q6ZRP7 698 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 LINC00696Q6ZRV3 163 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 TBC1D1Q86TI0 1168 aaPredicted RBP18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 LGI4Q8N135 537 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 LPAR4Q99677 370 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 EFCAB11Q9BUY7 163 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 NPLQ9BXD5 320 aaPredicted RBP18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 MMP25Q9NPA2 562 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 WWOXQ9NZC7 414 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 PTGFRNQ9P2B2 879 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 MAP10Q9P2G4 905 aa18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 MTRF1LQ9UGC7 380 aaKnown RBP18.88■□□□□ 0.61
CEACAM3-201ENST00000344550 CLGNO14967 610 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 CHST10O43529 356 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 URI1O94763 535 aaPredicted RBP18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 DDAH2O95865 285 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 S100BP04271 92 aaPredicted RBP18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 ZNF888P0CJ79 500 aaPredicted RBP18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 RNH1P13489 461 aaKnown RBP18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 CASP2P42575 452 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 UQCRFS1P47985 274 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 HYAL2Q12891 473 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 E2F2Q14209 437 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 ABRAXAS2Q15018 415 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 GLE1Q53GS7 698 aaKnown RBP18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 PAGE2BQ5JRK9 111 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 MMGT1Q8N4V1 131 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 ST6GALNAC3Q8NDV1 305 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 ADAMTS18Q8TE60 1221 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 GAL3ST3Q96A11 431 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 C19orf60Q96EN9 201 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 PEX11GQ96HA9 241 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 ZNF354BQ96LW1 612 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 C16orf45Q96MC5 204 aaPredicted RBP18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 LRRC1Q9BTT6 524 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 SPNS1Q9H2V7 528 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 RNF112Q9ULX5 631 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 PCDHGB6Q9Y5F9 930 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 COL12A1Q99715 3063 aa18.87■□□□□ 0.61
CEACAM3-201ENST00000344550 POLEQ07864 2286 aa18.86■□□□□ 0.61
CEACAM3-201ENST00000344550 PSMD12O00232 456 aaPredicted RBP18.86■□□□□ 0.61
CEACAM3-201ENST00000344550 TAPBPO15533 448 aa18.86■□□□□ 0.61
CEACAM3-201ENST00000344550 SLC35E2BP0CK96 405 aa18.86■□□□□ 0.61
CEACAM3-201ENST00000344550 GDF5P43026 501 aa18.86■□□□□ 0.61
CEACAM3-201ENST00000344550 ACTN3Q08043 901 aaPredicted RBP18.86■□□□□ 0.61
CEACAM3-201ENST00000344550 ELOAQ14241 798 aaKnown RBP18.86■□□□□ 0.61
CEACAM3-201ENST00000344550 TRADDQ15628 312 aa18.86■□□□□ 0.61
CEACAM3-201ENST00000344550 PDK4Q16654 411 aa18.86■□□□□ 0.61
CEACAM3-201ENST00000344550 BTBD16Q32M84 506 aa18.86■□□□□ 0.61
CEACAM3-201ENST00000344550 ADPRMQ3LIE5 342 aa18.86■□□□□ 0.61
CEACAM3-201ENST00000344550 RAPH1Q70E73 1250 aa18.86■□□□□ 0.61
CEACAM3-201ENST00000344550 LRRC70Q7Z2Q7 622 aa18.86■□□□□ 0.61
CEACAM3-201ENST00000344550 ISCA2Q86U28 154 aa18.86■□□□□ 0.61
CEACAM3-201ENST00000344550 ARMC2Q8NEN0 867 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms