RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 ZNF641Q96N77 438 aaPredicted RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 TEX10Q9NXF1 929 aaPredicted RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 FBXL21Q9UKT6 434 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 ZNRF3Q9ULT6 936 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 DUOX1Q9NRD9 1551 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 A0A1W2PPL8 197 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 A0A1W2PRQ8 180 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 NAP1L6A6NFF2 107 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 TLR4O00206 839 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 FLRT2O43155 660 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 SEPT4O43236 478 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 LRRTM2O43300 516 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 URODP06132 367 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 ZNF286BP0CG31 522 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 MAT2AP31153 395 aaKnown RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 LHX1P48742 406 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 CLCN4P51793 760 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 LASP1Q14847 261 aaKnown RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 GPR68Q15743 365 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 SLC39A12Q504Y0 691 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 RBFAQ8N0V3 343 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 ZNF527Q8NB42 609 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 C10orf82Q8WW14 230 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 CPT1BQ92523 772 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 RSC1A1Q92681 617 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 TMEM143Q96AN5 459 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 NUDT9Q9BW91 350 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 ATG10Q9H0Y0 220 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 PLXNB2O15031 1838 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 NPIPA5A0A0B4J1W7 369 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 PKMP14618 531 aaKnown RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 GLP1RP43220 463 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 RAB33AQ14088 237 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 RFTN1Q14699 578 aaPredicted RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 PGM5Q15124 567 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 GJB7Q6PEY0 223 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 ARL9Q6T311 187 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 PSD4Q8NDX1 1056 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 LRFN5Q96NI6 719 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 FUCA2Q9BTY2 467 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 NEUROD4Q9HD90 331 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 FAM212BQ9NTI7 297 aaPredicted RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 ANKMY1Q9P2S6 941 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 OTOGLQ3ZCN5 2332 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 BTAF1O14981 1849 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 FAM234BA2RU67 622 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 TNFRSF10BO14763 440 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 TMEM127O75204 238 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 CATP04040 527 aaKnown RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 INHAP05111 366 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 NR2C1P13056 603 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 KDELR1P24390 212 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 OR12D2P58182 307 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 RPP30P78346 268 aaKnown RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 IRF8Q02556 426 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 RSU1Q15404 277 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 UBE2NLQ5JXB2 153 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 IER5Q5VY09 327 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 ADGRD1Q6QNK2 874 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 TMEM205Q6UW68 189 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 C15orf52Q6ZUT6 534 aaKnown RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 PAQR8Q8TEZ7 354 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 LENG8Q96PV6 779 aaPredicted RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 EXOGQ9Y2C4 368 aaKnown RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 PEAK1Q9H792 1746 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 TMEM235A6NFC5 223 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 SIGLEC16A6NMB1 481 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 WASH3PC4AMC7 463 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 H7C4K7 107 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 ZNF207O43670 478 aaKnown RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 ONECUT3O60422 494 aaPredicted RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 SNCGO76070 127 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 MT-ND2P03891 347 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 POU2F1P14859 743 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 H3F3AP84243 136 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 TMEM132BQ14DG7 1078 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 DOK6Q6PKX4 331 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 C1orf87Q8N0U7 546 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 NXPE1Q8N323 547 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 AQP11Q8NBQ7 271 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 RNF128Q8TEB7 428 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 TGM7Q96PF1 710 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 PIH1D1Q9NWS0 290 aaKnown RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 FAM189A1O60320 539 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 GCATO75600 419 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 GADD45GO95257 159 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 IL1AP01583 271 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 ADRB1P08588 477 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 ADH7P40394 386 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 PLA2G16P53816 162 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 HSPA14Q0VDF9 509 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 FXNQ16595 210 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 BAK1Q16611 211 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 EARS2Q5JPH6 523 aaKnown RBP5.99□□□□□ -1.45
VCAN-203ENST00000343200 DPY19L2Q6NUT2 758 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 IQCHQ86VS3 1027 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 SIRT2Q8IXJ6 389 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 FTMTQ8N4E7 242 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 DAGLBQ8NCG7 672 aa5.99□□□□□ -1.45
VCAN-203ENST00000343200 OR1E3Q8WZA6 343 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms