RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 SLC45A3Q96JT2 553 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 GAL3ST4Q96RP7 486 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 TTYH1Q9H313 450 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 RDH8Q9NYR8 311 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 EIF3KQ9UBQ5 218 aaKnown RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 PCDHB3Q9Y5E6 796 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 DNAJC15Q9Y5T4 150 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 C4AP0C0L4 1744 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 C4BP0C0L5 1744 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 SLC35F4A4IF30 521 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 C2orf78A6NCI8 922 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 PRORSD1PA6NEY8 169 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 GLOD5A6NK44 160 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 PLOD2O00469 737 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 PITPNM1O00562 1244 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 IFNA7P01567 189 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 ITGB1P05556 798 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 TYRP14679 529 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 ATP4BP51164 291 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 RORCP51449 518 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 STXBP1P61764 594 aaKnown RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 MVKQ03426 396 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 HSF2Q03933 536 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 ABHD18Q0P651 414 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 NFATC2Q13469 925 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 LRP8Q14114 963 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 E2F2Q14209 437 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 TEAD2Q15562 447 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 LIN54Q6MZP7 749 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 HMGN2P46Q86SG4 172 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 RANBP3LQ86VV4 465 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 NUDT13Q86X67 352 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 TICAM1Q8IUC6 712 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 OR13J1Q8NGT2 312 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 GRHL3Q8TE85 626 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 TSEN15Q8WW01 171 aaKnown RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 RAB8BQ92930 207 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 RFKQ969G6 155 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 EFCAB11Q9BUY7 163 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 CFL2Q9Y281 166 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 MAN2B2Q9Y2E5 1009 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 RPL36Q9Y3U8 105 aaKnown RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 NDUFS4O43181 175 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 OR2B3O76000 313 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 C7P10643 843 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 FPR1P21462 350 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 PTX3P26022 381 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 MAB21L1Q13394 359 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 CYBRD1Q53TN4 286 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 GALNT10Q86SR1 603 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 LRRTM3Q86VH5 581 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 SPERTQ8NA61 448 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 RNASE11Q8TAA1 199 aaKnown RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 ZNF461Q8TAF7 563 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 GEMIN6Q8WXD5 167 aaKnown RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 RTP4Q96DX8 246 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 MED30Q96HR3 178 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 ZNF382Q96SR6 550 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 DHRS4Q9BTZ2 278 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 BCL2L14Q9BZR8 327 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 SLC35C2Q9NQQ7 365 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 PHF11Q9UIL8 331 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 INSL5Q9Y5Q6 135 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 A0A1W2PQ45 241 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 A0A1W2PQY0 241 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 IL4RP24394 825 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 CDKN1CP49918 316 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 NPAS3Q8IXF0 933 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 DCAF4L2Q8NA75 395 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 FBXO15Q8NCQ5 510 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 TRPV1Q8NER1 839 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 OR4C6Q8NH72 309 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 ZNF431Q8TF32 576 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 HERVK_113Q902F9 699 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 CMTM7Q96FZ5 175 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 RBM18Q96H35 190 aaKnown RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 RIPOR3Q96MK2 946 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 IL12RB2Q99665 862 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 DPH2Q9BQC3 489 aaPredicted RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 ELAC1Q9H777 363 aaKnown RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 TIGARQ9NQ88 270 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 OLAHQ9NV23 265 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 DNAJC27Q9NZQ0 273 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 ABCG2Q9UNQ0 655 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 A0A1B0GTW7 788 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 DAPL1A0PJW8 107 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 GRID2O43424 1007 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 EPOP01588 193 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 H1F0P07305 194 aaKnown RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 ETV3P41162 512 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 RAB8AP61006 207 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 CSTF1Q05048 431 aaKnown RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 ILF3Q12906 894 aaKnown RBP eCLIP7.8□□□□□ -1.163e-6■□□□□ 8.7
UBE4B-202ENST00000343090 BRAT1Q6PJG6 821 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 ARNTL2Q8WYA1 636 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 MROQ9BYG7 248 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 C20orf27Q9GZN8 174 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 MKRN2Q9H000 416 aaKnown RBP7.8□□□□□ -1.16
UBE4B-202ENST00000343090 WDR26Q9H7D7 661 aa7.8□□□□□ -1.16
UBE4B-202ENST00000343090 CARS2Q9HA77 564 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms