RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 GMEB1Q9Y692 573 aa3.35□□□□□ -1.87
CCDC66-202ENST00000341455 IGHV5-10-1A0A0J9YXX1 117 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 A0A0J9YY10 115 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 C2orf74A8MZ97 194 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 G3V2L1 256 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 H0YIV9 168 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 AGPSO00116 658 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 FOXE1O00358 373 aaPredicted RBP3.34□□□□□ -1.87
CCDC66-202ENST00000341455 DVL2O14641 736 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 TAPBPO15533 448 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 DUX1O43812 170 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 AHCYL1O43865 530 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 NPHS1O60500 1241 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 GLRA3O75311 464 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 NIPSNAP2O75323 286 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 GOSR1O95249 250 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 IGLV1-40P01703 118 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 ALOX15P16050 662 aaPredicted RBP3.34□□□□□ -1.87
CCDC66-202ENST00000341455 CYP2A7P20853 494 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 ENPP1P22413 925 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 PTX3P26022 381 aaPredicted RBP3.34□□□□□ -1.87
CCDC66-202ENST00000341455 AHRP35869 848 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 DCAF7P61962 342 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 GPR18Q14330 331 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 SLBPQ14493 270 aaKnown RBP eCLIP3.34□□□□□ -1.87
CCDC66-202ENST00000341455 SLC29A2Q14542 456 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 PFKFB4Q16877 469 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 DENND2CQ68D51 928 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 JMJD6Q6NYC1 403 aaPredicted RBP3.34□□□□□ -1.87
CCDC66-202ENST00000341455 SPESP1Q6UW49 350 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 RBM44Q6ZP01 1051 aaKnown RBP3.34□□□□□ -1.87
CCDC66-202ENST00000341455 PLXDC1Q8IUK5 500 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 ATG16L2Q8NAA4 619 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 SIMC1Q8NDZ2 872 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 OR52E1Q8NGJ3 308 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 OR2A1Q8NGT9 310 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 PROKR1Q8TCW9 393 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 SMPDL3AQ92484 453 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 DLG3Q92796 817 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 FKBP10Q96AY3 582 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 CFAP36Q96G28 342 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 TCTN2Q96GX1 697 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 APIPQ96GX9 242 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 GPR21Q99679 349 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 CCT7Q99832 543 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 CCDC77Q9BR77 488 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 TRMOQ9BU70 441 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 SLC29A3Q9BZD2 475 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 QRSL1Q9H0R6 528 aaKnown RBP3.34□□□□□ -1.87
CCDC66-202ENST00000341455 FBXO6Q9NRD1 293 aaPredicted RBP3.34□□□□□ -1.87
CCDC66-202ENST00000341455 TMEM184CQ9NVA4 438 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 IL1RAPL1Q9NZN1 696 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 STOX2Q9P2F5 926 aaPredicted RBP3.34□□□□□ -1.87
CCDC66-202ENST00000341455 TRPS1Q9UHF7 1281 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 TRMT6Q9UJA5 497 aaKnown RBP3.34□□□□□ -1.87
CCDC66-202ENST00000341455 MID2Q9UJV3 735 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 TENM4Q6N022 2769 aa3.34□□□□□ -1.87
CCDC66-202ENST00000341455 CCDC187A0A096LP49 1063 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 IGKV1-8A0A0C4DH67 115 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 TRBC2A0A5B9 178 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 TMEM114B3SHH9 223 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 GOLGA8MH3BSY2 632 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 BTN3A1O00481 513 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 INPP4BO15327 924 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 NVLO15381 856 aaKnown RBP3.34□□□□□ -1.88
CCDC66-202ENST00000341455 FRS3O43559 492 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 SKAP2O75563 359 aaPredicted RBP3.34□□□□□ -1.88
CCDC66-202ENST00000341455 WDR47O94967 919 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 CPNE6O95741 557 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 CATP04040 527 aaKnown RBP3.34□□□□□ -1.88
CCDC66-202ENST00000341455 FGF4P08620 206 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 CD63P08962 238 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 ACP5P13686 325 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 IL10P22301 178 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 HSPA7P48741 367 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 HHEXQ03014 270 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 CTBP1Q13363 440 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 LAPTM5Q13571 262 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 EFTUD2Q15029 972 aaKnown RBP eCLIP3.34□□□□□ -1.885e-13■■■■■ 36.5
CCDC66-202ENST00000341455 ISXQ2M1V0 245 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 ERCC6LQ2NKX8 1250 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 FBLN7Q53RD9 439 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 SH2D4BQ5SQS7 431 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 C1QL3Q5VWW1 255 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 LIPJQ5W064 366 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 FAM205BPQ63HN1 556 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 CPZQ66K79 652 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 FCRL6Q6DN72 434 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 PTRHD1Q6GMV3 140 aaKnown RBP3.34□□□□□ -1.88
CCDC66-202ENST00000341455 GUSBP11Q6P575 273 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 PAQR3Q6TCH7 311 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 FRMD7Q6ZUT3 714 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 MICALCLQ6ZW33 695 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 UBE3DQ7Z6J8 389 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 TRIM74Q86UV6 250 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 SLC22A9Q8IVM8 553 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 SIDT2Q8NBJ9 832 aaKnown RBP3.34□□□□□ -1.88
CCDC66-202ENST00000341455 MFSD9Q8NBP5 474 aa3.34□□□□□ -1.88
CCDC66-202ENST00000341455 BHLHE22Q8NFJ8 381 aaPredicted RBP3.34□□□□□ -1.88
CCDC66-202ENST00000341455 OR10G6Q8NH81 332 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms